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Autor
Agnihotri, Sameer 1 Albrecht, Steffen 1 Bader, Gary D 1 Bartels, Ute 1 Bouffet, Eric 1 Carlotti, Carlos G 1 Cavalli, Florence M G 1 Chambless, Lola B 1 Chan, Jennifer A 1 Chico Ponce de León, Fernando 1 Cho, Byung-Kyu 1 Cooper, Michael K 1 Daniels, Craig 1 Dirks, Peter B 1 Eberhart, Charles G 1 Elbabaa, Samer K 1 Faria, Claudia C 1 Farooq, Hamza 1 Faure-Conter, Cecile 1 Finocchiaro, Gaetano 1
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Pracoviště
2nd Department of Pediatrics Semmelweis Univ... 1 Centre de Pathologie EST Groupement Hospital... 1 Centre de Pathologie et Neuropathologie Est ... 1 Clinical Research Division Fred Hutchinson C... 1 Department of Anatomical and Cellular Pathol... 1 Department of Computer Science University of... 1 Department of Hematology and Medical Oncolog... 1 Department of Laboratory Medicine and Pathol... 1 Department of Neuro Oncology Istituto Neurol... 1 Department of Neurological Surgery Universit... 1 Department of Neurological Surgery Vanderbil... 1 Department of Neurology Erasmus University M... 1 Department of Neurology Vanderbilt Medical C... 1 Department of Neurosurgery Chonnam National ... 1 Department of Neurosurgery David Geffen Scho... 1 Department of Neurosurgery Division of Pedia... 1 Department of Neurosurgery Erasmus Universit... 1 Department of Neurosurgery Hospital Infantil... 1 Department of Neurosurgery Kitasato Universi... 1 Department of Neurosurgery Kumamoto Universi... 1
- Publikační typ
- Check Tag
- Kategorie
- Jazyk
- Země
- Časopis/zdroj
- Grant - země
- Grantová podpora
- Nejvíce citované
- Cavalli, Florence M G
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Remke, Marc
Autor Remke, Marc Department of Pediatric Oncology, Hematology, and Clinical Immunology, Medical Faculty, University Hospital Düsseldorf, Düsseldorf 40225, Germany; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON M5S 1A1, Canada; Department of Pediatric Neuro-Oncogenomics, German Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), Düsseldorf 40225, Germany
- Rampasek, Ladislav
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Peacock, John
Autor Peacock, John The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Developmental & Stem Cell Biology Program, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON M5S 1A1, Canada
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Shih, David J H
Autor Shih, David J H The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Developmental & Stem Cell Biology Program, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON M5S 1A1, Canada
- Luu, Betty
- Garzia, Livia
- Torchia, Jonathon
- Nor, Carolina
- Morrissy, A Sorana
PubMed
28609654
PubMed Central
PMC6163053
DOI
10.1016/j.ccell.2017.05.005
PII: S1535-6108(17)30201-5
Knihovny.cz E-zdroje
While molecular subgrouping has revolutionized medulloblastoma classification, the extent of heterogeneity within subgroups is unknown. Similarity network fusion (SNF) applied to genome-wide DNA methylation and gene expression data across 763 primary samples identifies very homogeneous clusters of patients, supporting the presence of medulloblastoma subtypes. After integration of somatic copy-number alterations, and clinical features specific to each cluster, we identify 12 different subtypes of medulloblastoma. Integrative analysis using SNF further delineates group 3 from group 4 medulloblastoma, which is not as readily apparent through analyses of individual data types. Two clear subtypes of infants with Sonic Hedgehog medulloblastoma with disparate outcomes and biology are identified. Medulloblastoma subtypes identified through integrative clustering have important implications for stratification of future clinical trials.
- Klíčová slova
- copy number, gene expression, integrative clustering, medulloblastoma, methylation, subgroups,
- MeSH
- genomika MeSH
- individualizovaná medicína * MeSH
- kohortové studie MeSH
- lidé MeSH
- meduloblastom klasifikace genetika terapie MeSH
- metylace DNA MeSH
- shluková analýza MeSH
- stanovení celkové genové exprese MeSH
- variabilita počtu kopií segmentů DNA MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Research Support, N.I.H., Extramural MeSH
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