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Trends in invasive bacterial diseases during the first 2 years of the COVID-19 pandemic: analyses of prospective surveillance data from 30 countries and territories in the IRIS Consortium
D. Shaw, R. Abad, Z. Amin-Chowdhury, A. Bautista, D. Bennett, K. Broughton, B. Cao, C. Casanova, EH. Choi, YW. Chu, H. Claus, J. Coelho, M. Corcoran, S. Cottrell, R. Cunney, L. Cuypers, T. Dalby, H. Davies, L. de Gouveia, AE. Deghmane, W....
Jazyk angličtina Země Anglie, Velká Británie
Typ dokumentu časopisecké články, práce podpořená grantem
Grantová podpora
206394/Z/17/Z
Wellcome Trust - United Kingdom
Department of Health - United Kingdom
218205/Z/19/Z
Wellcome Trust - United Kingdom
203141/Z/16/Z
Wellcome Trust - United Kingdom
Elsevier Open Access Journals od 2019
ROAD: Directory of Open Access Scholarly Resources od 2019
Odkazy
PubMed
37516557
DOI
10.1016/s2589-7500(23)00108-5
Knihovny.cz E-zdroje
- MeSH
- bakteriální infekce * MeSH
- COVID-19 * epidemiologie MeSH
- Haemophilus influenzae MeSH
- lidé MeSH
- Neisseria meningitidis * MeSH
- pandemie MeSH
- Streptococcus pneumoniae MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
BACKGROUND: The Invasive Respiratory Infection Surveillance (IRIS) Consortium was established to assess the impact of the COVID-19 pandemic on invasive diseases caused by Streptococcus pneumoniae, Haemophilus influenzae, Neisseria meningitidis, and Streptococcus agalactiae. We aimed to analyse the incidence and distribution of these diseases during the first 2 years of the COVID-19 pandemic compared to the 2 years preceding the pandemic. METHODS: For this prospective analysis, laboratories in 30 countries and territories representing five continents submitted surveillance data from Jan 1, 2018, to Jan 2, 2022, to private projects within databases in PubMLST. The impact of COVID-19 containment measures on the overall number of cases was analysed, and changes in disease distributions by patient age and serotype or group were examined. Interrupted time-series analyses were done to quantify the impact of pandemic response measures and their relaxation on disease rates, and autoregressive integrated moving average models were used to estimate effect sizes and forecast counterfactual trends by hemisphere. FINDINGS: Overall, 116 841 cases were analysed: 76 481 in 2018-19, before the pandemic, and 40 360 in 2020-21, during the pandemic. During the pandemic there was a significant reduction in the risk of disease caused by S pneumoniae (risk ratio 0·47; 95% CI 0·40-0·55), H influenzae (0·51; 0·40-0·66) and N meningitidis (0·26; 0·21-0·31), while no significant changes were observed for S agalactiae (1·02; 0·75-1·40), which is not transmitted via the respiratory route. No major changes in the distribution of cases were observed when stratified by patient age or serotype or group. An estimated 36 289 (95% prediction interval 17 145-55 434) cases of invasive bacterial disease were averted during the first 2 years of the pandemic among IRIS-participating countries and territories. INTERPRETATION: COVID-19 containment measures were associated with a sustained decrease in the incidence of invasive disease caused by S pneumoniae, H influenzae, and N meningitidis during the first 2 years of the pandemic, but cases began to increase in some countries towards the end of 2021 as pandemic restrictions were lifted. These IRIS data provide a better understanding of microbial transmission, will inform vaccine development and implementation, and can contribute to health-care service planning and provision of policies. FUNDING: Wellcome Trust, NIHR Oxford Biomedical Research Centre, Spanish Ministry of Science and Innovation, Korea Disease Control and Prevention Agency, Torsten Söderberg Foundation, Stockholm County Council, Swedish Research Council, German Federal Ministry of Health, Robert Koch Institute, Pfizer, Merck, and the Greek National Public Health Organization.
Blavatnik School of Government University of Oxford Oxford UK
CIBER de Enfermedades Infecciosas Instituto de Salud Carlos 3 Madrid Spain
CIBER of Epidemiology and Public Health Madrid Spain
Clinical Innovation Unit Rotunda Dublin Ireland
College of Medical Veterinary and Life Sciences University of Glasgow Glasgow UK
Department of Biology University of Oxford Oxford UK
Department of Clinical Microbiology Beaumont Hospital Dublin Ireland
Department of Microbiology Immunology and Transplantation KU Leuven Leuven Belgium
Department of Microbiology Royal College of Surgeons in Ireland Dublin Ireland
Department of Pediatrics Seoul National University College of Medicine Seoul South Korea
Faculty of Medicine and Pharmacy University of Mons Mons Belgium
Finnish Institute for Health and Welfare Helsinki Finland
Immunisation and Countermeasures Division UK Health Security Agency London UK
Instituto Nacional de Salud Bogotá Colombia
Irish Meningitis and Sepsis Reference Laboratory Children's Health Ireland Dublin Ireland
Karolinska Institutet Karolinska University Hospital Public Health Agency of Sweden Stockholm Sweden
Laboratoire National de Sante Dudelange Luxembourg
Laboratorio Central de Salud Pública Asunción Paraguay
Medicine Department Universitat Internacional de Catalunya Barcelona Spain
Meningococcal National Reference Centre Sciensano Belgium
Microbiology Department Institut Recerca Sant Joan de Déu Hospital Sant Joan de Deu Barcelona Spain
Ministère de la Santé Direction de la santé Luxembourg Luxembourg
National Microbiology Laboratory Public Health Agency of Canada Winnipeg MB Canada
National Reference Centre for Streptococcus pneumoniae University Hospitals Leuven Leuven Belgium
Nuffield Department of Population Health Big Data Institute University of Oxford Oxford UK
Population Health Medicine Public Health and Primary Care Trinity College Dublin Dublin Ireland
Public Health Agency Belfast UK
Public Health Agency of Sweden Solna Sweden
Public Health Laboratories Jerusalem Public Health Services Ministry of Health Jerusalem Israel
Public Health Wales Cardiff Wales UK
Respiratory and Vaccine Preventable Bacteria Reference Unit UK Health Security Agency London UK
Staphylococcus and Streptococcus Reference Section AMRHAI UK Health Security Agency London UK
Statens Serum Institut Department of Bacteria Parasites and Fungi Copenhagen Denmark
Sydney Institute for Infectious Diseases University of Sydney NSW Australia
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