Traceless Solid-Phase Synthesis of [6,7,8 + 5,6,7]-Fused Molecular Frameworks
Language English Country Switzerland Media electronic
Document type Journal Article
PubMed
29734722
PubMed Central
PMC6102595
DOI
10.3390/molecules23051090
PII: molecules23051090
Knihovny.cz E-resources
- Keywords
- bicyclic compounds, heterocycles, iminiums, scaffold, solid-phase synthesis,
- MeSH
- Cyclization MeSH
- Catalysis * MeSH
- Polymers chemical synthesis chemistry MeSH
- Stereoisomerism MeSH
- Solid-Phase Synthesis Techniques * MeSH
- Publication type
- Journal Article MeSH
- Names of Substances
- Polymers MeSH
We report two synthetic strategies for traceless solid-phase synthesis of molecular scaffolds comprising 6- to 8-membered rings fused with 5- to 7-membered rings. Traceless synthesis facilitated preparation of target molecules without any trace of polymer-supported linkers. The cyclization proceeded via acid-mediated tandem N-acylium ion formation followed by the nucleophilic addition of O- and C-nucleophiles. The presented synthetic strategy enabled, through the use of simple building blocks without any conformational preferences, the evaluation of the predisposition of different combinations of ring sizes to form fused ring molecular scaffolds. Compounds with any combination of [6,7 + 5,6,7] ring sizes were accessible with excellent crude purity. The 8-membered cyclic iminium was successfully fused only with the 5-membered cycle and larger fused ring systems were not formed, probably due to their instability.
See more in PubMed
Newman D.J., Cragg G.M., Snader K.M. The Influence of Natural Products Upon Drug Discovery. Nat. Prod. Rep. 2000;17:215–234. doi: 10.1039/a902202c. PubMed DOI
Newman D.J., Cragg G.M., Snader K.M. Natural Products as Sources of New Drugs Over the Period 1981–2002. J. Nat. Prod. 2003;66:1022–1037. doi: 10.1021/np030096l. PubMed DOI
Lopez-Vallejo F., Giulianotti M.A., Houghten R.A., Medina-Franco J.L. Expanding the Medicinally Relevant Chemical Space With Compound Libraries. Drug Discov. Today. 2012;17:718–726. doi: 10.1016/j.drudis.2012.04.001. PubMed DOI
Lovering F., Bikker J., Humblet C. Escape From Flatland: Increasing Saturation As an Approach to Improving Clinical Success. J. Med. Chem. 2009;52:6752–6756. doi: 10.1021/jm901241e. PubMed DOI
Wetzel S., Bon R.S., Kumar K., Waldmann H. Biology-Oriented Synthesis. Angew. Chem. Int. Ed. 2011;50:10800–10826. doi: 10.1002/anie.201007004. PubMed DOI
Kaiser M., Wetzel S., Kumar K., Waldmann H. Biology-Inspired Synthesis of Compound Libraries. Cell. Mol. Life Sci. 2008;65:1186–1201. doi: 10.1007/s00018-007-7492-1. PubMed DOI PMC
O’Connor C.J., Beckmann H.S.G., Spring D.R. Diversity-Oriented Synthesis: Producing Chemical Tools for Dissecting Biology. Chem. Soc. Rev. 2012;41:4444–4456. doi: 10.1039/c2cs35023h. PubMed DOI
La Venia A., Ventosa-Andrés P., Krchnak V. Peptidomimetics via Iminium Chemistry on Solid Phase: Single, Fused, and Bridged Heterocycles. Peptidomimetics II Top. Heterocycl. Chem. 2017;49:105–126.
Maryanoff B.E., Zhang H.C., Cohen J.H., Turchi I.J., Maryanoff C.A. Cyclizations of N-Acyliminium Ions. Chem. Rev. 2004;104:1431–1628. doi: 10.1021/cr0306182. PubMed DOI
Yazici A., Pyne S.G. Intermolecular Addition Reactions of N-Acyliminium Ions (Part I) Synthesis. 2009;3:339–368.
Yazici A., Pyne S.G. Intermolecular Addition Reactions of N-Acyliminium Ions (Part II) Synthesis. 2009;4:513–541.
Le Quement S.T., Nielsen T.E., Meldal M. Scaffold Diversity Through Intramolecular Cascade Reactions of Solid-Supported Cyclic N-Acyliminium Intermediates. J. Comb. Chem. 2007;9:1060–1072. doi: 10.1021/cc700097k. PubMed DOI
Ventosa-Andres P., La-Venia A., Ripoll C.A.B., Hradilova L., Krchnak V. Synthesis of Nature-Inspired Medium-Sized Fused Heterocycles From Amino Acids. Chem. Eur. J. 2015;21:13112–13119. doi: 10.1002/chem.201501746. PubMed DOI
Hanessian S., McNaughton-Smith G., Lombart H.G., Lubell W.D. Design and Synthesis of Conformationally Constrained Amino Acids As Versatile Scaffolds and Peptide Mimetics. Tetrahedron. 1997;53:12789–12854. doi: 10.1016/S0040-4020(97)00476-6. DOI
Nielsen T.E., Le Quement S., Meldal M. Solid-Phase Synthesis of Bicyclic Dipeptide Mimetics by Intramolecular Cyclization of Alcohols, Thiols, Amines, and Amides with N-Acyliminium Intermediates. Org. Lett. 2005;7:3601–3604. doi: 10.1021/ol050871j. PubMed DOI
Airiau E., Spangenberg T., Girard N., Schoenfelder A., Salvadori J., Taddei M., Mann A. A General Approach to Aza-Heterocycles by Means of Domino Sequences Driven by Hydroformylation. Chem. Eur. J. 2008;14:10938–10948. doi: 10.1002/chem.200801795. PubMed DOI
Bencsik J.R., Kercher T., O’Sulliva M., Josey J.A. Efficient, Stereoselective Synthesis of Oxazolo[3,2-a]Pyrazin-5-Ones: Novel Bicyclic Lactam Scaffolds From the Bicyclocondensation of 3-Aza-1,5-Ketoacids and Amino Alcohols. Org. Lett. 2003;5:2727–2730. doi: 10.1021/ol030065h. PubMed DOI
Ciofi L., Morvillo M., Sladojevich F., Guarna A., Trabocchi A. Skeletal Diversity by Sequential One-Pot and Stepwise Routes Using Morpholine Ester Scaffolds. Tetrahedron Lett. 2010;51:6282–6285. doi: 10.1016/j.tetlet.2010.09.103. DOI
Estiarte M.A., Rubiralta M., Diez A., Thormann M., Giralt E. Oxazolopiperidin-2-Ones As Type II’ Beta-Turn Mimetics: Synthesis and Conformational Analysis. J. Org. Chem. 2000;65:6992–6999. doi: 10.1021/jo000416v. PubMed DOI
Wirt U., Frohlich R., Wunsch B. Asymmetric Synthesis of 1-Substituted Tetrahydro-3-Benzoazepines. Tetrahedron: Asymmetry. 2005;16:2199–2202. doi: 10.1016/j.tetasy.2005.06.007. DOI
Vagner J., Qu H., Hruby V.J. Peptidomimetics, a Synthetic Tool of Drug Discovery. Curr. Opin. Chem. Biol. 2008;12:292–296. doi: 10.1016/j.cbpa.2008.03.009. PubMed DOI PMC
Lawandi J., Toumieux S., Seyer V., Campbell P., Thielges S., Juillerat-Jeanneret L., Moitessier N. Constrained Peptidomimetics Reveal Detailed Geometric Requirements of Covalent Prolyl Oligopeptidase Inhibitors. J. Med. Chem. 2009;52:6672–6684. doi: 10.1021/jm901013a. PubMed DOI
Wang W., Yang J., Ying J., Xiong C., Zhang J., Cai C., Hruby V.J. Stereoselective Synthesis of Dipeptide Beta-Turn Mimetics: 7-Benzyl and 8-Phenyl Substituted Azabicyclo[4.3.0]Nonane Amino Acid Esters. J. Org. Chem. 2002;67:6353–6360. PubMed
Tong Y., Fobian Y., Wu M., Boyd N.D., Moeller K.D. Conformationally Constrained Substance P Analogues: The Total Synthesis of a Constrained Peptidomimetic for the Phe7-Phe8 Region. J. Org. Chem. 2000;65:2484–2493. doi: 10.1021/jo991649t. PubMed DOI
Hanessian S., Buckle R., Bayrakdarian M. Design and Synthesis of a Novel Class of Constrained Tricyclic Pyrrolizidinone Carboxylic Acids As Carbapenem Mimics. J. Org. Chem. 2002;67:3387–3397. doi: 10.1021/jo0111715. PubMed DOI
Cox E.D., Cook J.M. The Pictet-Spengler Condensation: A New Direction for an Old Reaction. Chem. Rev. 1995;95:1797–1842. doi: 10.1021/cr00038a004. DOI
Nielsen T.E., Meldal M. Solid-Phase Synthesis of Pyrroloisoquinolines Via the Intramolecular N-Acyliminium Pictet-Spengler Reaction. J. Comb. Chem. 2005;7:599–610. doi: 10.1021/cc050008a. PubMed DOI
Nielsen T.E., Meldal M. Solid-Phase Intramolecular N-Acyliminium Pictet-Spengler Reactions As Crossroads to Scaffold Diversity. J. Org. Chem. 2004;69:3765–3773. doi: 10.1021/jo049918p. PubMed DOI
Diness F., Beyer J., Meldal M. Solid-Phase Synthesis of Tetrahydro-Beta-Carbolines and Tetrahydroisoquinolines by Stereoselective Intramolecular N-Carbamyliminium Pictet-Spengler Reactions. Chem. Eur. J. 2006;12:8056–8066. doi: 10.1002/chem.200600138. PubMed DOI
Petersen R., LeQuement S.T., Nielsen T.E. Synthesis of a Natural Product-Like Compound Collection Through Oxidative Cleavage and Cyclization of Linear Peptides. Angew. Chem. Int. Ed. 2014;53:11778–11782. doi: 10.1002/anie.201405747. PubMed DOI
Schutznerova E., Oliver A.G., Zajicek J., Krchnak V. Polymer-Supported Stereoselective Synthesis of (1S,5S)-6-Oxa-3,8-Diazabicyclo[3.2.1]Octanes. Eur. J. Org. Chem. 2013:3158–3165. doi: 10.1002/ejoc.201300093. DOI
La Venia A., Lemrova B., Krchnak V. Regioselective Incorporation of Backbone Constraints Compatible With Traditional Solid-Phase Peptide Synthesis. ACS Comb. Sci. 2013;15:59–72. doi: 10.1021/co300125m. PubMed DOI
Ventosa-Andres P., Barea Ripoll C.A., La-Venia A., Krchnak V. Solid-Phase Synthesis of Fused 1,4-Diazepanone Peptidomimetics Via Tandem N-Iminium Ion Cyclization-Nucleophilic Addition. Tetrahedron Lett. 2015;56:5424–5428. doi: 10.1016/j.tetlet.2015.08.015. DOI
La Venia A., Dolensky B., Krchnak V. Polymer-Supported Stereoselective Synthesis of Tetrahydro-2H-Oxazolo[3,2-a]Pyrazin-5(3H)-Ones From N-(2-Oxo-Ethyl)-Derivatized Dipeptides Via Eastbound Iminiums. ACS Comb. Sci. 2013;15:162–167. doi: 10.1021/co3001567. PubMed DOI
Hanessian S., Xie F. Polymer-Bound P-Alkoxybenzyl Trichloracetimidates: Reagents for the Protection of Alcohols as Benzyl Ethers on Solid-Phase. Tetrahedron Lett. 1998;39:733–736. doi: 10.1016/S0040-4039(97)10684-0. DOI
Cayley A.N., Gallagher K.A., Menard-Moyon C., Schmidt J.P., Diorazio L.J., Taylor R.J.K. Preparation of Novel Polycyclic Heterocycles Using a Tin(II) Chloride Dihydrate-Mediated Deacetalisation-Bicyclisation Sequence. Synthesis. 2008:3846–3856.
Reid M., Taylor R.J.K. A Stannous Chloride-Induced Deacetalisation–Cyclisation Process to Prepare the ABC Ring System of ‘Upenamide. Tetrahedron Lett. 2004;45:4181–4183. doi: 10.1016/j.tetlet.2004.03.119. DOI
Ladziat V. Recent Applications of Rare-Earth Metal(III) Triflates in Cycloaddition and Cyclization Reactions. Arkivoc. 2014;2014:307–336. doi: 10.1002/chin.201519331. DOI
Marti-Centelles V., Pandey M.D., Burguete M.I., Luis S.V. Macrocyclization Reactions: The Importance of Conformational, Configurational, and Template-Induced Preorganization. Chem. Rev. 2015;115:8736–8834. doi: 10.1021/acs.chemrev.5b00056. PubMed DOI
Vassilikogiannakis G., Margaros I., Tofi M. Olefin Metathesis: Remote Substituents Governing the Stereoselectivity of 11-Membered-Ring Formation. Org. Lett. 2004;6:205–208. doi: 10.1021/ol036156w. PubMed DOI
Jensen K.J., Alsina J., Songster M.F., Vagner J., Albericio F., Barany G. Backbone Amide Linker (BAL) Strategy for Solid-Phase Synthesis of C-Terminal-Modified and Cyclic Peptides 1, 2, 3. J. Am. Chem. Soc. 1998;120:5441–5452. doi: 10.1021/ja974116f. DOI
Krchnak V., Padera V. The Domino Blocks: A Simple Solution for Parallel Solid Phase Organic Synthesis. Bioorg. Med. Chem. Lett. 1998;22:3261–3264. doi: 10.1016/S0960-894X(98)00594-0. PubMed DOI