Complete nucleotide sequence and genome organization of red clover associated virus 1 (RCaV1), a putative member of the genus Waikavirus (family Secoviridae, order Picornavirales)
Language English Country Austria Media print-electronic
Document type Journal Article
Grant support
RVO 60077344
Akademie Věd České Republiky
LD15035
Ministerstvo Školství, Mládeže a Tělovýchovy
FA1407
European Cooperation in Science and Technology
PubMed
30159684
DOI
10.1007/s00705-018-4005-5
PII: 10.1007/s00705-018-4005-5
Knihovny.cz E-resources
- MeSH
- Phylogeny MeSH
- Genome, Viral * MeSH
- Molecular Sequence Data MeSH
- Plant Diseases virology MeSH
- Open Reading Frames MeSH
- Satellite Viruses classification genetics isolation & purification MeSH
- Base Sequence MeSH
- Sequence Analysis, DNA MeSH
- Trifolium virology MeSH
- Waikavirus classification genetics isolation & purification MeSH
- Publication type
- Journal Article MeSH
Using high-throughput sequencing, a novel waikavirus was identified in a mixed virus infection of red clover (Trifolium pratense L.). Its complete genomic sequence was determined and characterized. The virus, tentatively named red clover associated virus 1 (RCaV1), is phylogenetically related to members of the genus Waikavirus (family Secoviridae, order Picornavirales).
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