Satellite DNAs (satDNAs) are abundant components of eukaryotic genomes, playing pivotal roles in chromosomal organization, genome stability, and evolution. Here, we combined cytogenetic and genomic methods to characterize the satDNAs in the genomes of Leptidea butterflies. Leptidea is characterized by the presence of a high heterochromatin content, large genomes, and extensive chromosomal reshuffling as well as the occurrence of cryptic species. We show that, in contrast to other Lepidoptera, satDNAs constitute a considerable proportion of Leptidea genomes, ranging between 4.11% and 11.05%. This amplification of satDNAs, together with the hyperactivity of transposable elements, contributes to the substantial genome expansion in Leptidea. Using chromosomal mapping, we show that, particularly LepSat01-100 and LepSat03-167 satDNAs, are preferentially localized in heterochromatin exhibiting variable distribution that may have contributed to the highly diverse karyotypes within the genus. The satDNAs also exhibit W-chromosome accumulation, suggesting their involvement in sex chromosome evolution. Our results provide insights into the dynamics of satDNAs in Lepidoptera genomes and highlight their role in genome expansion and chromosomal organization, which could influence the speciation process. The high proportion of repetitive DNAs in the genomes of Leptidea underscores the complex evolutionary dynamics revealing the interplay between repetitive DNAs and genomic architecture in the genus.
Bacillus thuringiensis (Bt) is known for its Cry and Vip3A pesticidal proteins with high selectivity to target pests. Here, we assessed the potential of a novel neotropical Bt strain (UFT038) against six lepidopteran pests, including two Cry-resistant populations of fall armyworm, Spodoptera frugiperda. We also sequenced and analyzed the genome of Bt UFT038 to identify genes involved in insecticidal activities or encoding other virulence factors. In toxicological bioassays, Bt UFT038 killed and inhibited the neonate growth in a concentration-dependent manner. Bt UFT038 and HD-1 were equally toxic against S. cosmioides, S. frugiperda (S_Bt and R_Cry1 + 2Ab populations), Helicoverpa zea, and H. armigera. However, larval growth inhibition results indicated that Bt UFT038 was more toxic than HD-1 to S. cosmioides, while HD-1 was more active against Chrysodeixis includens. The draft genome of Bt UFT038 showed the cry1Aa8, cry1Ac11, cry1Ia44, cry2Aa9, cry2Ab35, and vip3Af5 genes. Besides this, genes encoding the virulence factors (inhA, plcA, piplC, sph, and chi1-2) and toxins (alo, cytK, hlyIII, hblA-D, and nheA-C) were also identified. Collectively, our findings reveal the potential of the Bt UFT038 strain as a source of insecticidal genes against lepidopteran pests, including S. cosmioides and S. frugiperda.
- MeSH
- Bacillus thuringiensis * genetika metabolismus MeSH
- bakteriální proteiny genetika metabolismus MeSH
- biologická kontrola škůdců MeSH
- endotoxiny metabolismus MeSH
- faktory virulence metabolismus MeSH
- Glycine max MeSH
- hemolyziny genetika metabolismus farmakologie MeSH
- insekticidy * farmakologie metabolismus MeSH
- larva MeSH
- lidé MeSH
- můry * MeSH
- novorozenec MeSH
- Spodoptera metabolismus MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- novorozenec MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
Tularemie je zoonóza, jejíž původcem je Francisella tularensis, gramnegativní aerobní bakterie patřící do třídy Gammaproteobacteria a čeledi Francisellaceae. Navzdory skutečnosti, že F. tularensis může mít významný dopad na zdraví člověka, existuje o aktuálním výskytu tohoto patogenu v různých hematofágních členovcích pouze velmi málo údajů. Cílem studie bylo provést rozsáhlý molekulární screening různých potenciálních hematofágních vektorů: klíšťat (4348 jedinců druhů Ixodes ricinus, Dermacentor reticulatus a Haemaphysalis concinna), komárů (4100 jedinců druhu Aedes vexans) a muchniček (6900 jedinců Simulium spp.) na přítomnost F. tularensis na Břeclavsku v roce 2022. Pozitivní byly pouze 2 vzorky, které obsahovaly DNA specifickou pro F. tularensis subsp. holarctica. Oba vzorky pocházely z klíštěte D. reticulatus a to jak po infestaci srnce, tak jednoho směsného vzorku nasbíraných klíšťat (n = 10). Oba pozitivní vzorky byly sekvenovány a byla potvrzena přítomnost F. tularensis subsp. holarctica. Přítomnost
Tularemia is a zoonosis caused by Francisella tularensis, a gram-negative aerobic bacterium belonging to the class of Gammaproteobacteria and the family Francisellaceae. Despite its undeniable importance for human health, there is little data on the current distribution of F. tularensis in various hematophagous arthropods. The aim of this study was to perform a mass molecular screening of different possible hematophagous vectors: ticks (4348 ticks of the species Ixodes ricinus, Dermacentor reticulatus, and Haemaphysalis concinna), mosquitoes (4100 specimens of Aedes vexans), and blackflies (6900 specimens of the Simulium spp.) for the presence of F. tularensis in the Břeclav district in 2022. Only two specimens were positive for the specific DNA of Francisella tularensis subsp. holarctica. Both samples originated from D. reticulatus, one collected from infested roe deer and the other included in a pooled sample (n = 10). Both positive samples were sequenced, and the presence of F. tularensis subsp. holarctica was confirmed. In addition, the absence of F. tularensis in mosquitoes and black flies was documented.
- MeSH
- Francisella tularensis * patogenita MeSH
- genetické techniky MeSH
- infekce přenášené vektorem * MeSH
- komáří přenašeči mikrobiologie MeSH
- kontrola infekčních nemocí * metody MeSH
- lidé MeSH
- nemoci přenášené klíšťaty epidemiologie mikrobiologie přenos MeSH
- Simuliidae mikrobiologie MeSH
- tularemie epidemiologie mikrobiologie přenos MeSH
- zdroje nemoci mikrobiologie MeSH
- Check Tag
- lidé MeSH
- Geografické názvy
- Česká republika MeSH
The infection of Bombyx mori nucleopolyhedrovirus (BmNPV) is one of the main causes of economic losses in sericulture. Thus, it is essential to establish rapid and effective method for BmNPV detection. In the present study, we have developed a recombinase-aided amplification (RAA) to amplify the BmNPV genomic DNA at 37 °C within 30 min, and achieved a rapid detection method by coupling with a lateral flow dipstick (LFD). The RAA-LFD method had a satisfactory detection limit of 6 copies/μL of recombinant plasmid pMD19-T-IE1, and BmNPV infection of silkworm can be detected 12 h post-infection. This method was highly specific for BmNPV, and without cross-reactivity to other silkworm pathogens. In contrast to conventional polymerase chain reaction (PCR), the RAA-LFD assay showed higher sensitivity, cost-saving, and especially is apt to on-site detection of BmNPV infection in the sericulture production.
- MeSH
- bourec * virologie MeSH
- DNA virů genetika MeSH
- limita detekce MeSH
- nukleopolyhedroviry * genetika izolace a purifikace MeSH
- rekombinasy * metabolismus genetika MeSH
- senzitivita a specificita MeSH
- techniky amplifikace nukleových kyselin * metody MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- hodnotící studie MeSH
- Klíčová slova
- granadaene,
- MeSH
- bakteriální zoonózy etiologie MeSH
- brouci mikrobiologie patogenita MeSH
- feces mikrobiologie MeSH
- grampozitivní koky * chemie izolace a purifikace patogenita MeSH
- jedlý hmyz * mikrobiologie patogenita MeSH
- Lactococcus chemie izolace a purifikace patogenita MeSH
- Leontopithecus mikrobiologie MeSH
- riziko MeSH
- střevní mikroflóra MeSH
- Publikační typ
- přehledy MeSH
BACKGROUND: Several new species of Leishmania have recently emerged in Europe, probably as the result of global changes and increased human migration from endemic areas. In this study, we tested whether two sand fly species, the Western Mediterranean Phlebotomus perniciosus and the Eastern Mediterranean P. tobbi, are competent vectors of L. donovani, L. major and L. martiniquensis. METHODOLOGY/PRINCIPAL FINDINGS: Sand flies were infected through the chick skin membrane using Leishmania species and strains of various geographical origins. Leishmania infections were evaluated by light microscopy and qPCR, and the representation of morphological forms was assessed from Giemsa-stained gut smears. Neither P. perniciosus nor P. tobbi supported the development of L. martiniquensis, but L. major and L. donovani in both species survived defecation of blood meal remnants, colonized the stomodeal valve and produced metacyclic stages. The results with L donovani have shown that infection rates in sand flies can be strain-specific; therefore, to determine vector competence or refractoriness, it is optimal to test at least two strains of Leishmania. CONCLUSIONS, SIGNIFICANCE: Both sand fly species tested are potential vectors of L. donovani and L. major in Mediterranean area. However, further studies will be needed to identify European vectors of L. martiniquensis and to test the ability of other European sand fly species to transmit L. major, L. donovani, L. tropica and L. infantum.
- MeSH
- hmyz - vektory * parazitologie fyziologie MeSH
- kur domácí parazitologie MeSH
- Leishmania * fyziologie klasifikace genetika MeSH
- leishmanióza přenos parazitologie MeSH
- lidé MeSH
- Phlebotomus * parazitologie fyziologie MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Geografické názvy
- Evropa MeSH
We investigated gene expression patterns in Lutzomyia and Phlebotomus sand fly vectors of leishmaniases. Using quantitative PCR, we assessed the expression stability of potential endogenous control genes commonly used in dipterans. We analyzed Lutzomyia longipalpis and Phlebotomus papatasi samples from L3 and L4 larval stages, adult sand flies of different sexes, diets, dsRNA injection, and Leishmania infection. Six genes were evaluated: actin, α-tubulin, GAPDH, 60 S ribosomal proteins L8 and L32 (RiboL8 and RiboL32), and elongation factor 1-α (EF1-α). EF1-α was among the most stably expressed along with RiboL8 in L. longipalpis larvae and RiboL32 in adults. In P. papatasi, EF1-α and RiboL32 were the top in larvae, while EF1-α and actin were the most stable in adults. RiboL8 and actin were the most stable genes in dissected tissues and infected guts. Additionally, five primer pairs designed for L. longipalpis or P. papatasi were effective in PCR with Lutzomyia migonei, Phlebotomus duboscqi, Phlebotomus perniciosus, and Sergentomyia schwetzi cDNA. Furthermore, L. longipalpis RiboL32 and P. papatasi α-tubulin primers were suitable for qPCR with cDNA from the other four species. Our research provides tools to enhance relative gene expression studies in sand flies, facilitating the selection of endogenous control for qPCR.
- MeSH
- esenciální geny * MeSH
- hmyz - vektory genetika MeSH
- hmyzí geny MeSH
- larva genetika MeSH
- Leishmania genetika MeSH
- Phlebotomus * genetika MeSH
- Psychodidae genetika MeSH
- stanovení celkové genové exprese metody MeSH
- zvířata MeSH
- Check Tag
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
Na konci března roku 2024 byl v zahradním jezírku v areálu rodinného domu v Borovanech v jižních Čechách zaznamenán výskyt larev všech larválních stádií (v množství 15 jedinců na dm3) a několik kukel, které byly později, na základě vylíhlých imag, identifikovány jako invazní druh Aedes koreicus. Vzhledem k velmi časnému nálezu larev, jejich množství i stáří můžeme hovořit o prvním průkazu přezimování invazního druhu komára rodu Aedes na našem území.
At the end of March 2024 in Borovany in South Bohemia in a garden pond in the vicinity of a private house a number of larvae (15 individuals per dm3) and some pupae were found which were later, based on hatched imagery, identified as the invasive mosquito species Aedes koreicus. Given the early finding of larvae, their number and age, we can conclude that this is the first record of the invasive genus Aedes overwintering in our area.
- MeSH
- Aedes * klasifikace růst a vývoj MeSH
- klimatické změny MeSH
- komáří přenašeči MeSH
- lidé MeSH
- nemoci přenášené komáry MeSH
- zavlečené druhy MeSH
- Check Tag
- lidé MeSH
- Geografické názvy
- Česká republika MeSH
To identify patterns in big medical datasets and use Deep Learning and Machine Learning (ML) to reliably diagnose Cardio Vascular Disease (CVD), researchers are currently delving deeply into these fields. Training on large datasets and producing highly accurate validation results is exceedingly difficult. Furthermore, early and precise diagnosis is necessary due to the increased global prevalence of cardiovascular disease (CVD). However, the increasing complexity of healthcare datasets makes it challenging to detect feature connections and produce precise predictions. To address these issues, the Intelligent Cardiovascular Disease Diagnosis based on Ant Colony Optimisation with Enhanced Deep Learning (ICVD-ACOEDL) model was developed. This model employs feature selection (FS) and hyperparameter optimization to diagnose CVD. Applying a min-max scaler, medical data is first consistently prepared. The key feature that sets ICVD-ACOEDL apart is the use of Ant Colony Optimisation (ACO) to select an optimal feature subset, which in turn helps to upgrade the performance of the ensuring deep learning enhanced neural network (DLENN) classifier. The model reforms the hyperparameters of DLENN for CVD classification using Bayesian optimization. Comprehensive evaluations on benchmark medical datasets show that ICVD-ACOEDL exceeds existing techniques, indicating that it could have a significant impact on CVD diagnosis. The model furnishes a workable way to increase CVD classification efficiency and accuracy in real-world medical situations by incorporating ACO for feature selection, min-max scaling for data pre-processing, and Bayesian optimization for hyperparameter tweaking.
- MeSH
- Bayesova věta MeSH
- deep learning * MeSH
- diagnóza počítačová metody MeSH
- Formicidae MeSH
- kardiovaskulární nemoci * diagnóza MeSH
- lidé MeSH
- neuronové sítě * MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
