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Geographical Distribution of Ljungan Virus in Small Mammals in Europe
C. Fevola, C. Rossi, F. Rosso, M. Girardi, R. Rosà, M. Manica, L. Delucchi, D. Rocchini, CX. Garzon-Lopez, D. Arnoldi, A. Bianchi, E. Buzan, N. Charbonnel, M. Collini, L. Ďureje, F. Ecke, N. Ferrari, S. Fischer, EL. Gillingham, B. Hörnfeldt, M....
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
32487013
DOI
10.1089/vbz.2019.2542
Knihovny.cz E-zdroje
- MeSH
- fylogeneze MeSH
- hlodavci MeSH
- hmyzožravci MeSH
- Parechovirus klasifikace genetika izolace a purifikace MeSH
- pikornavirové infekce epidemiologie veterinární MeSH
- polymerázová řetězová reakce s reverzní transkripcí MeSH
- roční období MeSH
- tělesná hmotnost MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Evropa MeSH
Ljungan virus (LV), which belongs to the Parechovirus genus in the Picornaviridae family, was first isolated from bank voles (Myodes glareolus) in Sweden in 1998 and proposed as a zoonotic agent. To improve knowledge of the host association and geographical distribution of LV, tissues from 1685 animals belonging to multiple rodent and insectivore species from 12 European countries were screened for LV-RNA using reverse transcriptase (RT)-PCR. In addition, we investigated how the prevalence of LV-RNA in bank voles is associated with various intrinsic and extrinsic factors. We show that LV is widespread geographically, having been detected in at least one host species in nine European countries. Twelve out of 21 species screened were LV-RNA PCR positive, including, for the first time, the red vole (Myodes rutilus) and the root or tundra vole (Alexandromys formerly Microtus oeconomus), as well as in insectivores, including the bicolored white-toothed shrew (Crocidura leucodon) and the Valais shrew (Sorex antinorii). Results indicated that bank voles are the main rodent host for this virus (overall RT-PCR prevalence: 15.2%). Linear modeling of intrinsic and extrinsic factors that could impact LV prevalence showed a concave-down relationship between body mass and LV occurrence, so that subadults had the highest LV positivity, but LV in older animals was less prevalent. Also, LV prevalence was higher in autumn and lower in spring, and the amount of precipitation recorded during the 6 months preceding the trapping date was negatively correlated with the presence of the virus. Phylogenetic analysis on the 185 base pair species-specific sequence of the 5' untranslated region identified high genetic diversity (46.5%) between 80 haplotypes, although no geographical or host-specific patterns of diversity were detected.
CBGP INRAE CIRAD IRD Montpellier SupAgro Université de Montpellier Montpellier France
Comparative Tropical Medicine and Parasitology Ludwig Maximilians Universität Munich Germany
Department for Terrestrial Ecology Norwegian Institute for Nature Research Trondheim Norway
Department of Botany and Zoology Masaryk University Brno Czech Republic
Department of Cellular Computational and Integrative Biology CIBIO University of Trento Povo Italy
Department of Climate Change and Health Public Health England London United Kingdom
Department of Theoretical and Applied Sciences Università degli Studi dell'Insubria Varese Italy
Department of Veterinary Biosciences University of Helsinki Helsinki Finland
Department of Veterinary Medicine Università degli Studi di Milano Milan Italy
Department of Virology Faculty of Medicine University of Helsinki Helsinki Finland
Department of Viroscience Erasmus University Medical Centre Rotterdam the Netherlands
Ecology and Vegetation Physiology Group Universidad de los Andes Bogotá Colombia
Institute of Animal Hygiene and Veterinary Public Health University of Leipzig Leipzig Germany
Institute of Vertebrate Biology Academy of Sciences of the Czech Republic Studenec Czech Republic
Natural Resources Institute Finland Helsinki Finland
School of Biosciences Cardiff University Cardiff United Kingdom
Sezione Zoologia dei Vertebrati MUSE Museo delle Scienze Trento Italy
Slovak Academy of Sciences Institute of Parasitology Košice Slovakia
Slovak Academy of Sciences Institute of Zoology Bratislava Slovakia
Citace poskytuje Crossref.org
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- $a Fevola, Cristina $u Department of Biodiversity and Molecular Ecology, Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy $u Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
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- $a Ljungan virus (LV), which belongs to the Parechovirus genus in the Picornaviridae family, was first isolated from bank voles (Myodes glareolus) in Sweden in 1998 and proposed as a zoonotic agent. To improve knowledge of the host association and geographical distribution of LV, tissues from 1685 animals belonging to multiple rodent and insectivore species from 12 European countries were screened for LV-RNA using reverse transcriptase (RT)-PCR. In addition, we investigated how the prevalence of LV-RNA in bank voles is associated with various intrinsic and extrinsic factors. We show that LV is widespread geographically, having been detected in at least one host species in nine European countries. Twelve out of 21 species screened were LV-RNA PCR positive, including, for the first time, the red vole (Myodes rutilus) and the root or tundra vole (Alexandromys formerly Microtus oeconomus), as well as in insectivores, including the bicolored white-toothed shrew (Crocidura leucodon) and the Valais shrew (Sorex antinorii). Results indicated that bank voles are the main rodent host for this virus (overall RT-PCR prevalence: 15.2%). Linear modeling of intrinsic and extrinsic factors that could impact LV prevalence showed a concave-down relationship between body mass and LV occurrence, so that subadults had the highest LV positivity, but LV in older animals was less prevalent. Also, LV prevalence was higher in autumn and lower in spring, and the amount of precipitation recorded during the 6 months preceding the trapping date was negatively correlated with the presence of the virus. Phylogenetic analysis on the 185 base pair species-specific sequence of the 5' untranslated region identified high genetic diversity (46.5%) between 80 haplotypes, although no geographical or host-specific patterns of diversity were detected.
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