continuous germination index
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PREMISE: Seed germination over time is characterized by a sigmoid curve, called a germination curve, in which the percentage (or absolute number) of seeds that have completed germination is plotted against time. A number of individual coefficients have been developed to characterize this germination curve. However, as germination is considered to be a qualitative developmental response of an individual seed that occurs at one time point, but individual seeds within a given treatment respond at different time points, it has proven difficult to develop a single index that satisfactorily incorporates both percentage and rate. The aim of this paper is to develop a new coefficient, the continuous germination index (CGI), which quantifies seed germination as a continuous process, and to compare the CGI with other commonly used indexes. METHODS: To create the new index, the germination curves were smoothed using nondecreasing splines and the CGI was derived as the area under the resulting spline. For the comparison of the CGI with other common indexes, a regression model with functional response was developed. RESULTS: Using both an experimentally obtained wild pea (Pisum sativum subsp. elatius) seed data set and a hypothetical data set, we showed that the CGI is able to characterize the germination process better than most other indices. The CGI captures the local behavior of the germination curves particularly well. DISCUSSION: The CGI can be used advantageously for the characterization of the germination process. Moreover, B-spline coefficients extracted by its construction can be employed for the further statistical processing of germination curves using functional data analysis methods.
- Klíčová slova
- continuous germination index, functional regression, germination curve, nondecreasing positive smoothing splines, seed germination,
- Publikační typ
- časopisecké články MeSH
Maturation of trematode larval stages is expected to be temporally and spatially adapted to maximise the encounter with the adequate downstream host, i.e. the host, which will be infected by this parasite stage. Since studies on intramolluscan parasite maturation are scarce but important in the context of parasite transmission, the larval development inside sporocysts was monitored during upshore residency of the snail host Gibbula adansonii (Trochidae), i.e., from March to May (2011 and 2013), when these snails temporarily reside in the intertidal habitat of a Western Mediterranean lagoon (40° 37' 35″ N, 0° 44' 31″ E, Spain). Data on the relative quantity of different maturation stages of Cainocreadium labracis and Macvicaria obovata (Opecoelidae) parasitising the G. adansonii as well as on snail and sporocyst size were explored using linear models and linear mixed models. The effect of the trematodes on snail growth was shown to be species-specific, with snail and sporocyst size acting as proxies of the reproductive capacity of M. obovata but not that of C. labracis. The number of cercarial embryos and germinal balls did not show monthly variation in either parasite species, but a higher number of mature stages and the highest maturity index was found in April. Hence, during the snail's limited spawning-related presence in the upshore waters of the lagoon, continuous production and output of infectious cercariae was observed, which indicates a link between larval maturation and snail migration. The synchronization of snails, mature parasite transmission stages and downstream hosts in time and space guarantees a successful completion of the life cycle.
- Klíčová slova
- Cainocreadium labracis, Larval maturation, Macvicaria obovata, Mediterranean lagoon, Snail migration, Trematodes,
- MeSH
- cerkárie růst a vývoj MeSH
- druhová specificita MeSH
- ekosystém MeSH
- hlemýždi parazitologie MeSH
- interakce hostitele a parazita MeSH
- larva růst a vývoj MeSH
- lineární modely MeSH
- migrace zvířat MeSH
- mořská voda MeSH
- oocysty MeSH
- roční období MeSH
- rozmnožování MeSH
- stadia vývoje MeSH
- Trematoda růst a vývoj MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Španělsko MeSH