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Crystallization of recombinant bifunctional nuclease TBN1 from tomato
T. Koval', P. Lipovová, T. Podzimek, J. Matoušek, J. Dušková, T. Skálová, A. Stěpánková, J. Hašek, J. Dohnálek
Language English Country England, Great Britain
Document type Journal Article, Research Support, Non-U.S. Gov't
NLK
Free Medical Journals
from 2005 to 2013
PubMed Central
from 2005 to 2013
Europe PubMed Central
from 2005 to 2013
Wiley Online Library (archiv)
from 2005-01-01 to 2012-12-31
- MeSH
- Deoxyribonucleases chemistry genetics MeSH
- Ions chemistry MeSH
- Protein Conformation MeSH
- Crystallization MeSH
- Crystallography, X-Ray MeSH
- Molecular Sequence Data MeSH
- Recombinant Proteins chemistry genetics MeSH
- Plant Proteins chemistry genetics MeSH
- Solanum lycopersicum chemistry genetics MeSH
- Zinc chemistry MeSH
- Animals MeSH
- Check Tag
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
The endonuclease TBN1 from Solanum lycopersicum (tomato) was expressed in Nicotiana benthamiana leaves and purified with suitable quality and in suitable quantities for crystallization experiments. Two crystal forms (orthorhombic and rhombohedral) were obtained and X-ray diffraction experiments were performed. The presence of natively bound Zn2+ ions was confirmed by X-ray fluorescence and by an absorption-edge scan. X-ray diffraction data were collected from the orthorhombic (resolution of 5.2 Å) and rhombohedral (best resolution of 3.2 Å) crystal forms. SAD, MAD and MR methods were applied for solution of the phase problem, with partial success. TBN1 contains three Zn2+ ions in a similar spatial arrangement to that observed in nuclease P1 from Penicillium citrinum.
Institute of Biotechnology CAS v v i Vídeňská 1083 142 20 Praha 4 Czech Republic
Institute of Macromolecular Chemistry AS CR vvi Heyrovsky sq 2 162 06 Prague 6 Czech Republic
Institute of Physics AS CR v v i Na Slovance 2 182 21 Praha 8 Czech Republic
University of Chemistry and Technology Technická 5 166 28 Praha 6 Czech Republic
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- $a The endonuclease TBN1 from Solanum lycopersicum (tomato) was expressed in Nicotiana benthamiana leaves and purified with suitable quality and in suitable quantities for crystallization experiments. Two crystal forms (orthorhombic and rhombohedral) were obtained and X-ray diffraction experiments were performed. The presence of natively bound Zn2+ ions was confirmed by X-ray fluorescence and by an absorption-edge scan. X-ray diffraction data were collected from the orthorhombic (resolution of 5.2 Å) and rhombohedral (best resolution of 3.2 Å) crystal forms. SAD, MAD and MR methods were applied for solution of the phase problem, with partial success. TBN1 contains three Zn2+ ions in a similar spatial arrangement to that observed in nuclease P1 from Penicillium citrinum.
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