-
Je něco špatně v tomto záznamu ?
Tissue profiling by nanogold-mediated mass spectrometry and artificial neural networks in the mouse model of human primary hyperoxaluria 1
Jan Houška, Eladia María Peña-Méndez, Juan R. Hernandez-Fernaud, Eduardo Salido, Aleš Hampl, Josef Havel, Petr Vaňhara
Jazyk angličtina Země Česko
Typ dokumentu práce podpořená grantem
- Klíčová slova
- MALDI-TOF mass spectrometry,
- MeSH
- játra patologie MeSH
- ledviny patologie MeSH
- myši MeSH
- neuronové sítě * MeSH
- primární hyperoxalurie * diagnóza patologie MeSH
- spektrometrie hmotnostní - ionizace laserem za účasti matrice * statistika a číselné údaje MeSH
- transaminasy nedostatek MeSH
- zvířata MeSH
- Check Tag
- myši MeSH
- zvířata MeSH
- Publikační typ
- práce podpořená grantem MeSH
Correct assessment of tissue histopathology is a necessary prerequisite for any clinical diagnosis. Nowadays, classical methods of histochemistry and immunohistochemistry are complemented by various techniques adopted from molecular biology and bioanalytical chemistry. Mass spectrometry profiling or imaging offered a new level of tissue visualization in the last decade, revealing hidden patterns of tissue molecular organization. It can be adapted to diagnostic purposes to improve decisions on complex and morphologically not apparent diagnoses. In this work, we successfully combined tissue profiling by mass spectrometry with analysis by artificial neural networks to classify normal and diseased liver and kidney tissues in a mouse model of primary hyperoxaluria type 1. Lack of the liver l-alanine:glyoxylate aminotransferase catalyzing conversion of l-alanine and glyoxylate to pyruvate and glycine causes accumulation of oxalate salts in various tissues, especially urinary system, resulting in compromised renal function and finally end stage renal disease. As the accumulation of oxalate salts alters chemical composition of affected tissues, it makes it available for examination by bioanalytical methods. We demonstrated that the direct tissue MALDI-TOF MS combined with neural computing offers an efficient tool for diagnosis of primary hyperoxaluria type I and potentially for other metabolic disorders altering chemical composition of tissues.
Department of Chemistry Faculty of Sciences Masaryk University Brno
Department of Histology and Embryology Faculty of Medicine Masaryk University Brno
International Clinical Research Center St Anne's University Hospital Brno
Citace poskytuje Crossref.org
Literatura
- 000
- 00000naa a2200000 a 4500
- 001
- bmc14065928
- 003
- CZ-PrNML
- 005
- 20140917143912.0
- 007
- ta
- 008
- 140721s2014 xr d f 000 0eng||
- 009
- AR
- 024 7_
- $a 10.1016/j.jab.2013.12.001 $2 doi
- 040 __
- $a ABA008 $d ABA008 $e AACR2 $b cze
- 041 0_
- $a eng
- 044 __
- $a xr
- 100 1_
- $a Houška, Jan $7 xx0280591 $u Department of Chemistry, Faculty of Sciences, Masaryk University, Brno
- 245 10
- $a Tissue profiling by nanogold-mediated mass spectrometry and artificial neural networks in the mouse model of human primary hyperoxaluria 1 / $c Jan Houška, Eladia María Peña-Méndez, Juan R. Hernandez-Fernaud, Eduardo Salido, Aleš Hampl, Josef Havel, Petr Vaňhara
- 504 __
- $a Literatura
- 520 3_
- $a Correct assessment of tissue histopathology is a necessary prerequisite for any clinical diagnosis. Nowadays, classical methods of histochemistry and immunohistochemistry are complemented by various techniques adopted from molecular biology and bioanalytical chemistry. Mass spectrometry profiling or imaging offered a new level of tissue visualization in the last decade, revealing hidden patterns of tissue molecular organization. It can be adapted to diagnostic purposes to improve decisions on complex and morphologically not apparent diagnoses. In this work, we successfully combined tissue profiling by mass spectrometry with analysis by artificial neural networks to classify normal and diseased liver and kidney tissues in a mouse model of primary hyperoxaluria type 1. Lack of the liver l-alanine:glyoxylate aminotransferase catalyzing conversion of l-alanine and glyoxylate to pyruvate and glycine causes accumulation of oxalate salts in various tissues, especially urinary system, resulting in compromised renal function and finally end stage renal disease. As the accumulation of oxalate salts alters chemical composition of affected tissues, it makes it available for examination by bioanalytical methods. We demonstrated that the direct tissue MALDI-TOF MS combined with neural computing offers an efficient tool for diagnosis of primary hyperoxaluria type I and potentially for other metabolic disorders altering chemical composition of tissues.
- 650 _2
- $a zvířata $7 D000818
- 650 _2
- $a myši $7 D051379
- 650 12
- $a primární hyperoxalurie $x diagnóza $x patologie $7 D006960
- 650 12
- $a neuronové sítě $7 D016571
- 650 12
- $a spektrometrie hmotnostní - ionizace laserem za účasti matrice $x statistika a číselné údaje $7 D019032
- 650 _2
- $a transaminasy $x nedostatek $7 D000637
- 650 _2
- $a játra $x patologie $7 D008099
- 650 _2
- $a ledviny $x patologie $7 D007668
- 653 00
- $a MALDI-TOF mass spectrometry
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Peña-Méndez, Eladia María $u Department of Analytical Chemistry, Nutrition and Food Science, Faculty of Chemistry, University of La Laguna, La Laguna, Tenerife, Spain
- 700 1_
- $a Hernandez-Fernaud, Juan R. $u Rare Disease Center (CIBERER) and Biomedical Institute (CIBICAN), University La Laguna, Tenerife, Spain
- 700 1_
- $a Salido, Eduardo $u Rare Disease Center (CIBERER) and Biomedical Institute (CIBICAN), University La Laguna, Tenerife, Spain
- 700 1_
- $a Hampl, Aleš, $d 1962- $7 ola2002153626 $u Department of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno; International Clinical Research Center, St. Anne's University Hospital, Brno
- 700 1_
- $a Havel, Josef, $d 1940- $7 jk01040227 $u Department of Chemistry, Faculty of Sciences, Masaryk University, Brno
- 700 1_
- $a Vaňhara, Petr, $d 1980- $7 xx0106079 $u Department of Histology and Embryology, Faculty of Medicine, Masaryk University, Brno
- 773 0_
- $t Journal of applied biomedicine $x 1214-021X $g Roč. 12, č. 2 (2014), s. 119-125 $w MED00012667
- 856 41
- $u https://jab.zsf.jcu.cz/pdfs/jab/2014/02/07.pdf $y plný text volně přístupný
- 910 __
- $a ABA008 $b B 2301 $c 1249 $y 4 $z 0
- 990 __
- $a 20140721124002 $b ABA008
- 991 __
- $a 20140917144321 $b ABA008
- 999 __
- $a ok $b bmc $g 1033406 $s 864704
- BAS __
- $a 3
- BMC __
- $a 2014 $b 12 $c 2 $d 119-125 $i 1214-021X $m Journal of Applied Biomedicine $n J. Appl. Biomed. (Čes. Budějovice Print) $x MED00012667
- LZP __
- $c NLK188 $d 20140917 $a NLK 2014-15/mk