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Global Dispersal Pattern of HIV Type 1 Subtype CRF01_AE: A Genetic Trace of Human Mobility Related to Heterosexual Sexual Activities Centralized in Southeast Asia
K. Angelis, J. Albert, I. Mamais, G. Magiorkinis, A. Hatzakis, O. Hamouda, D. Struck, J. Vercauteren, AM. Wensing, I. Alexiev, B. Åsjö, C. Balotta, RJ. Camacho, S. Coughlan, A. Griskevicius, Z. Grossman, A. Horban, LG. Kostrikis, S. Lepej, K....
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
NLK
Free Medical Journals
od 1997 do Před 1 rokem
Open Access Digital Library
od 1997-04-01
PubMed
25512631
DOI
10.1093/infdis/jiu666
Knihovny.cz E-zdroje
- MeSH
- databáze faktografické MeSH
- fylogeneze MeSH
- fylogeografie * MeSH
- heterosexualita * MeSH
- HIV infekce přenos virologie MeSH
- HIV-1 klasifikace genetika MeSH
- lidé MeSH
- populační dynamika * MeSH
- shluková analýza MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Evropa MeSH
- jihovýchodní Asie MeSH
BACKGROUND: Human immunodeficiency virus type 1 (HIV-1) subtype CRF01_AE originated in Africa and then passed to Thailand, where it established a major epidemic. Despite the global presence of CRF01_AE, little is known about its subsequent dispersal pattern. METHODS: We assembled a global data set of 2736 CRF01_AE sequences by pooling sequences from public databases and patient-cohort studies. We estimated viral dispersal patterns, using statistical phylogeographic analysis run over bootstrap trees estimated by the maximum likelihood method. RESULTS: We show that Thailand has been the source of viral dispersal to most areas worldwide, including 17 of 20 sampled countries in Europe. Japan, Singapore, Vietnam, and other Asian countries have played a secondary role in the viral dissemination. In contrast, China and Taiwan have mainly imported strains from neighboring Asian countries, North America, and Africa without any significant viral exportation. DISCUSSION: The central role of Thailand in the global spread of CRF01_AE can be probably explained by the popularity of Thailand as a vacation destination characterized by sex tourism and by Thai emigration to the Western world. Our study highlights the unique case of CRF01_AE, the only globally distributed non-B clade whose global dispersal did not originate in Africa.
Alcohol Research Group University California Berkeley
Centre de Recherche Public de la Sante Luxembourg
Department of Hygiene Epidemiology and Medical Statistics Medical School University of Athens Greece
Department of Virology University Medical Center Utrecht
Division of Infectious Diseases Division of Clinical Virology Karolinska Institute
Erasmus MC University Medical Center Rotterdam the Netherlands
Faculty of Medicine Slovenian HIV AIDS Reference Center University of Ljubljana Slovenia
Hospital of Infectious Diseases Warsaw Poland
IrsiCaixa Foundation Badalona Spain
Lithuanian AIDS Center Vilnius
National Center of Infectious and Parasitic Diseases Sofia Bulgaria
National Institute for Infectious Diseases Prof Dr Matei Bals Bucharest Romania
National Institute of Health and Welfare Helsinki Finland
National Reference Laboratory of AIDS National Institute of Health Prague Czech Republic
Robert Koch Institut Berlin Germany
Slovak Medical University Bratislava
Statens Serum Institute Copenhagen Denmark
University College Dublin Ireland
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