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Meta-analysis of genome-wide association studies discovers multiple loci for chronic lymphocytic leukemia
SI. Berndt, NJ. Camp, CF. Skibola, J. Vijai, Z. Wang, J. Gu, A. Nieters, RS. Kelly, KE. Smedby, A. Monnereau, W. Cozen, A. Cox, SS. Wang, Q. Lan, LR. Teras, M. Machado, M. Yeager, AR. Brooks-Wilson, P. Hartge, MP. Purdue, BM. Birmann, CM. Vajdic,...
Jazyk angličtina Země Anglie, Velká Británie
Typ dokumentu časopisecké články, metaanalýza, Research Support, N.I.H., Extramural, Research Support, N.I.H., Intramural, práce podpořená grantem, Research Support, U.S. Gov't, Non-P.H.S., Research Support, U.S. Gov't, P.H.S.
Perzistentní odkaz
https://www.medvik.cz/link/bmc16027601
Online
Plný text
NLK
Directory of Open Access Journals
od 2015
Free Medical Journals
od 2010
Nature Open Access
od 2010-12-01
PubMed Central
od 2012
Europe PubMed Central
od 2012
ProQuest Central
od 2010-01-01
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od 2015-01-01
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od 2015-01-01
Medline Complete (EBSCOhost)
od 2012-11-01
Health & Medicine (ProQuest)
od 2010-01-01
ROAD: Directory of Open Access Scholarly Resources
od 2010
PubMed
26956414
DOI
10.1038/ncomms10933
Knihovny.cz E-zdroje
- MeSH
- adaptorové proteiny signální transdukční genetika MeSH
- běloši genetika MeSH
- celogenomová asociační studie * MeSH
- chronická lymfatická leukemie genetika MeSH
- genetická predispozice k nemoci MeSH
- jednonukleotidový polymorfismus MeSH
- lidé MeSH
- membránové proteiny genetika MeSH
- proteiny regulující apoptózu genetika MeSH
- proteiny T-boxu genetika MeSH
- protoonkogenní proteiny genetika MeSH
- serpiny genetika MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- metaanalýza MeSH
- práce podpořená grantem MeSH
- Research Support, N.I.H., Extramural MeSH
- Research Support, N.I.H., Intramural MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
- Research Support, U.S. Gov't, P.H.S. MeSH
Chronic lymphocytic leukemia (CLL) is a common lymphoid malignancy with strong heritability. To further understand the genetic susceptibility for CLL and identify common loci associated with risk, we conducted a meta-analysis of four genome-wide association studies (GWAS) composed of 3,100 cases and 7,667 controls with follow-up replication in 1,958 cases and 5,530 controls. Here we report three new loci at 3p24.1 (rs9880772, EOMES, P=2.55 × 10(-11)), 6p25.2 (rs73718779, SERPINB6, P=1.97 × 10(-8)) and 3q28 (rs9815073, LPP, P=3.62 × 10(-8)), as well as a new independent SNP at the known 2q13 locus (rs9308731, BCL2L11, P=1.00 × 10(-11)) in the combined analysis. We find suggestive evidence (P<5 × 10(-7)) for two additional new loci at 4q24 (rs10028805, BANK1, P=7.19 × 10(-8)) and 3p22.2 (rs1274963, CSRNP1, P=2.12 × 10(-7)). Pathway analyses of new and known CLL loci consistently show a strong role for apoptosis, providing further evidence for the importance of this biological pathway in CLL susceptibility.
Cancer Epidemiology Unit University of Oxford Oxford OX3 7LF UK
Chronic Disease Prevention Unit National Institute for Health and Welfare FI 00271 Helsinki Finland
Department of Biomedical Science University of Cagliari Monserrato 09042 Cagliari Italy
Department of Biostatistics University of Alabama at Birmingham Birmingham Alabama 35233 USA
Department of Biostatistics Yale School of Public Health New Haven Connecticut 06520 USA
Department of Epidemiology Harvard School of Public Health Boston Massachusetts 02115 USA
Department of Epidemiology MD Anderson Cancer Center Houston Texas 77030 USA
Department of Health Sciences Research Mayo Clinic Rochester Minnesota 55905 USA
Department of Health Sciences University of York York YO10 5DD UK
Department of Immunology Genetics and Pathology Uppsala University 75105 Uppsala Sweden
Department of Internal Medicine Huntsman Cancer Institute Salt Lake City Utah 84112 USA
Department of Internal Medicine University of Utah School of Medicine Salt Lake City Utah 84108 USA
Department of Laboratory Medicine and Pathology Mayo Clinic Rochester Minnesota 55905 USA
Department of Medicine Duke University and VA Medical Centers Durham North Carolina 27710 USA
Department of Medicine Mayo Clinic Rochester Minnesota 55905 USA
Department of Medicine Memorial Sloan Kettering Cancer Center New York New York 10065 USA
Department of Oncology University of Sheffield Sheffield South Yorkshire S10 1NS UK
Department of Statistics Dongguk University Seoul 100 715 Republic of Korea
Division of Cancer Epidemiology and Genetics National Cancer Institute Bethesda Maryland 20892 USA
Division of Cancer Etiology City of Hope Beckman Research Institute Duarte California 91030 USA
Division of Endocrinology Diabetes and Metabolism The Ohio State University Columbus Ohio 43210 USA
Division of Hematology Mayo Clinic Rochester Minnesota 55905 USA
Division of Hematology Oncology Mayo Clinic Phoenix Arizona 85054 USA
Epidemiology Research Program American Cancer Society Atlanta Georgia 30303 USA
Interdisciplinary Department of Medicine University of Bari 70124 Bari Italy
International Agency for Research on Cancer 69372 Lyon France
Ontario Health Study Toronto Ontario Canada M5G 0A3
School of Nursing and Human Sciences Dublin City University Dublin 9 Ireland
School of Public Health Imperial College London London W2 1PG UK
Sydney School of Public Health The University of Sydney Sydney New South Wales 2006 Australia
The Tisch Cancer Institute Icahn School of Medicine at Mount Sinai New York New York 10029 USA
Citace poskytuje Crossref.org
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- $a Meta-analysis of genome-wide association studies discovers multiple loci for chronic lymphocytic leukemia / $c SI. Berndt, NJ. Camp, CF. Skibola, J. Vijai, Z. Wang, J. Gu, A. Nieters, RS. Kelly, KE. Smedby, A. Monnereau, W. Cozen, A. Cox, SS. Wang, Q. Lan, LR. Teras, M. Machado, M. Yeager, AR. Brooks-Wilson, P. Hartge, MP. Purdue, BM. Birmann, CM. Vajdic, P. Cocco, Y. Zhang, GG. Giles, A. Zeleniuch-Jacquotte, C. Lawrence, R. Montalvan, L. Burdett, A. Hutchinson, Y. Ye, TG. Call, TD. Shanafelt, AJ. Novak, NE. Kay, M. Liebow, JM. Cunningham, C. Allmer, H. Hjalgrim, HO. Adami, M. Melbye, B. Glimelius, ET. Chang, M. Glenn, K. Curtin, LA. Cannon-Albright, WR. Diver, BK. Link, GJ. Weiner, L. Conde, PM. Bracci, J. Riby, DK. Arnett, D. Zhi, JM. Leach, EA. Holly, RD. Jackson, LF. Tinker, Y. Benavente, N. Sala, D. Casabonne, N. Becker, P. Boffetta, P. Brennan, L. Foretova, M. Maynadie, J. McKay, A. Staines, KG. Chaffee, SJ. Achenbach, CM. Vachon, LR. Goldin, SS. Strom, JF. Leis, JB. Weinberg, NE. Caporaso, AD. Norman, AJ. De Roos, LM. Morton, RK. Severson, E. Riboli, P. Vineis, R. Kaaks, G. Masala, E. Weiderpass, MD. Chirlaque, RC. Vermeulen, RC. Travis, MC. Southey, RL. Milne, D. Albanes, J. Virtamo, S. Weinstein, J. Clavel, T. Zheng, TR. Holford, DJ. Villano, A. Maria, JJ. Spinelli, RD. Gascoyne, JM. Connors, KA. Bertrand, E. Giovannucci, P. Kraft, A. Kricker, J. Turner, MG. Ennas, GM. Ferri, L. Miligi, L. Liang, B. Ma, J. Huang, S. Crouch, JH. Park, N. Chatterjee, KE. North, JA. Snowden, J. Wright, JF. Fraumeni, K. Offit, X. Wu, S. de Sanjose, JR. Cerhan, SJ. Chanock, N. Rothman, SL. Slager,
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- $a Chronic lymphocytic leukemia (CLL) is a common lymphoid malignancy with strong heritability. To further understand the genetic susceptibility for CLL and identify common loci associated with risk, we conducted a meta-analysis of four genome-wide association studies (GWAS) composed of 3,100 cases and 7,667 controls with follow-up replication in 1,958 cases and 5,530 controls. Here we report three new loci at 3p24.1 (rs9880772, EOMES, P=2.55 × 10(-11)), 6p25.2 (rs73718779, SERPINB6, P=1.97 × 10(-8)) and 3q28 (rs9815073, LPP, P=3.62 × 10(-8)), as well as a new independent SNP at the known 2q13 locus (rs9308731, BCL2L11, P=1.00 × 10(-11)) in the combined analysis. We find suggestive evidence (P<5 × 10(-7)) for two additional new loci at 4q24 (rs10028805, BANK1, P=7.19 × 10(-8)) and 3p22.2 (rs1274963, CSRNP1, P=2.12 × 10(-7)). Pathway analyses of new and known CLL loci consistently show a strong role for apoptosis, providing further evidence for the importance of this biological pathway in CLL susceptibility.
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- 700 1_
- $a Villano, Danylo J $u Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
- 700 1_
- $a Maria, Ann $u Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
- 700 1_
- $a Spinelli, John J $u Cancer Control Research, BC Cancer Agency, Vancouver, British Columbia, Canada V5Z1L3. School of Population and Public Health, University of British Columbia, Vancouver, British Columbia, Canada V6T1Z3.
- 700 1_
- $a Gascoyne, Randy D $u Center for Lymphoid Cancer, BC Cancer Agency, Vancouver, British Columbia, Canada V5Z1L3. Department of Pathology, University of British Columbia, Vancouver, British Columbia, Canada V6T1Z3.
- 700 1_
- $a Connors, Joseph M $u Center for Lymphoid Cancer, BC Cancer Agency, Vancouver, British Columbia, Canada V5Z1L3. Department of Medicine, University of British Columbia, Vancouver, British Columbia, Canada V6T1Z3.
- 700 1_
- $a Bertrand, Kimberly A $u Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts 02115, USA. Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts 02115, USA.
- 700 1_
- $a Giovannucci, Edward $u Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts 02115, USA. Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts 02115, USA. Department of Nutrition, Harvard School of Public Health, Boston, Massachusetts 02115, USA.
- 700 1_
- $a Kraft, Peter $u Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts 02115, USA. Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts 02115, USA.
- 700 1_
- $a Kricker, Anne $u Sydney School of Public Health, The University of Sydney, Sydney, New South Wales 2006, Australia.
- 700 1_
- $a Turner, Jenny $u Faculty of Medicine and Health Sciences, Macquarie University, Sydney, New South Wales 2109, Australia. Department of Histopathology, Douglass Hanly Moir Pathology, Sydney, New South Wales 2113, Australia.
- 700 1_
- $a Ennas, Maria Grazia $u Department of Biomedical Science, University of Cagliari, Monserrato, 09042 Cagliari, Italy.
- 700 1_
- $a Ferri, Giovanni M $u Interdisciplinary Department of Medicine, University of Bari, 70124 Bari, Italy.
- 700 1_
- $a Miligi, Lucia $u Environmental and Occupational Epidemiology Unit, Cancer Prevention and Research Institute (ISPO), 50139 Florence, Italy.
- 700 1_
- $a Liang, Liming $u Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts 02115, USA. Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts 02115, USA.
- 700 1_
- $a Ma, Baoshan $u Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts 02115, USA. College of Information Science and Technology, Dalian Maritime University, Dalian, Liaoning Province 116026, China.
- 700 1_
- $a Huang, Jinyan $u Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts 02115, USA.
- 700 1_
- $a Crouch, Simon $u Department of Health Sciences, University of York, York YO10 5DD, UK.
- 700 1_
- $a Park, Ju-Hyun $u Department of Statistics, Dongguk University, Seoul 100-715, Republic of Korea.
- 700 1_
- $a Chatterjee, Nilanjan $u Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland 20892, USA.
- 700 1_
- $a North, Kari E $u Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA. Carolina Center for Genome Sciences, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
- 700 1_
- $a Snowden, John A $u Department of Oncology, University of Sheffield, Sheffield, South Yorkshire S10 1NS, UK. Department of Haematology, Sheffield Teaching Hospitals NHS Foundation Trust, Royal Hallamshire Hospital, Sheffield, South Yorkshire S10 2TN, UK.
- 700 1_
- $a Wright, Josh $u Department of Oncology, University of Sheffield, Sheffield, South Yorkshire S10 1NS, UK. Department of Haematology, Sheffield Teaching Hospitals NHS Foundation Trust, Royal Hallamshire Hospital, Sheffield, South Yorkshire S10 2TN, UK.
- 700 1_
- $a Fraumeni, Joseph F $u Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland 20892, USA.
- 700 1_
- $a Offit, Kenneth $u Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
- 700 1_
- $a Wu, Xifeng $u Department of Epidemiology, MD Anderson Cancer Center, Houston, Texas 77030, USA.
- 700 1_
- $a de Sanjose, Silvia $u Cancer Epidemiology Research Programme, Catalan Institute of Oncology-IDIBELL, L'Hospitalet de Llobregat, Barcelona 08908, Spain. CIBER de Epidemiología y Salud Pública (CIBERESP), 08036 Barcelona, Spain.
- 700 1_
- $a Cerhan, James R $u Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota 55905, USA.
- 700 1_
- $a Chanock, Stephen J $u Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland 20892, USA.
- 700 1_
- $a Rothman, Nathaniel $u Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland 20892, USA.
- 700 1_
- $a Slager, Susan L $u Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota 55905, USA.
- 773 0_
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