-
Je něco špatně v tomto záznamu ?
Molecular characterization of bacteremic Escherichia coli isolates in Romania
CR. Usein, R. Papagheorghe, M. Oprea, M. Condei, M. Strãuţ,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
- MeSH
- antibakteriální látky farmakologie MeSH
- bakteriemie * MeSH
- beta-laktamasy genetika MeSH
- Escherichia coli klasifikace účinky léků genetika izolace a purifikace MeSH
- faktory virulence genetika MeSH
- fylogeneze MeSH
- genotyp MeSH
- infekce vyvolané Escherichia coli mikrobiologie MeSH
- lidé MeSH
- mikrobiální testy citlivosti MeSH
- molekulární typizace * MeSH
- multilokusová sekvenční typizace MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Rumunsko MeSH
The increasing prevalence of invasive infections caused by antibiotic resistant Escherichia coli strains in Romanian patients, already mentioned in the European reports, requires better knowledge of their specific traits. Thus, a set of 38 E. coli blood isolates, collected between 2010 and 2012 at one of the local hospitals participating into the European Antimicrobial Resistance Surveillance Network, was investigated retrospectively with respect to the phylogenetic origin, extraintestinal virulence-associated markers (i.e. fimH, papC, papG alleles, sfa/foc, afa/dra, hly, cnf1, sat, iucC, fyuA, ibeA), and beta-lactamase encoding genes (i.e. bla CTX-M, bla TEM, and bla SHV alleles). The isolates with extended-spectrum beta-lactamase (ESBL) phenotypes were further characterized using PCR-based replicon typing and multilocus sequencing typing. For ST131 members, pulsed-field gel electrophoresis (PFGE) and PCR-based detection of fimH30 allele were performed. Overall, the isolates were more likely members of the major phylogenetic group A (53 %) and to a lesser extent of groups B2 (29 %), D (10 %), and B1 (8 %). All but three of the virulence markers sought (i.e. papGI, hly, cnf1) were detected with prevalence ranging from 3 % (i.e. ibeA, papGIII) to 87 % (fimH). As expected, the most complex genotypes (four to seven virulence markers) defined the isolates derived from phylogenetic groups B2 and D. ESBL producers were bla CTX-M-15-positive, mostly of phylogroup A (67 %), harboured IncF multireplicon plasmids, and belonged to six sequence types (i.e. ST10, ST131, ST167, ST410, ST540, ST1275). Members of ST10 clonal complex (i.e. ST10, ST167) were the most common. The ST131 isolates belonged to H30 subclone and displayed 74 % similarity at PFGE analysis.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc17004351
- 003
- CZ-PrNML
- 005
- 20170127122243.0
- 007
- ta
- 008
- 170127s2016 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1007/s12223-015-0427-6 $2 doi
- 024 7_
- $a 10.1007/s12223-015-0427-6 $2 doi
- 035 __
- $a (PubMed)26452764
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Usein, Codruţa-Romaniţa $u Cantacuzino National Institute of Research-Development for Microbiology and Immunology, Splaiul Independentei 103, sector 5, 050096, Bucharest, Romania. rusein@cantacuzino.ro. Carol Davila University of Medicine and Pharmacy, Bulevardul Eroii Sanitari 8, sector 5, 050474, Bucharest, Romania. rusein@cantacuzino.ro.
- 245 10
- $a Molecular characterization of bacteremic Escherichia coli isolates in Romania / $c CR. Usein, R. Papagheorghe, M. Oprea, M. Condei, M. Strãuţ,
- 520 9_
- $a The increasing prevalence of invasive infections caused by antibiotic resistant Escherichia coli strains in Romanian patients, already mentioned in the European reports, requires better knowledge of their specific traits. Thus, a set of 38 E. coli blood isolates, collected between 2010 and 2012 at one of the local hospitals participating into the European Antimicrobial Resistance Surveillance Network, was investigated retrospectively with respect to the phylogenetic origin, extraintestinal virulence-associated markers (i.e. fimH, papC, papG alleles, sfa/foc, afa/dra, hly, cnf1, sat, iucC, fyuA, ibeA), and beta-lactamase encoding genes (i.e. bla CTX-M, bla TEM, and bla SHV alleles). The isolates with extended-spectrum beta-lactamase (ESBL) phenotypes were further characterized using PCR-based replicon typing and multilocus sequencing typing. For ST131 members, pulsed-field gel electrophoresis (PFGE) and PCR-based detection of fimH30 allele were performed. Overall, the isolates were more likely members of the major phylogenetic group A (53 %) and to a lesser extent of groups B2 (29 %), D (10 %), and B1 (8 %). All but three of the virulence markers sought (i.e. papGI, hly, cnf1) were detected with prevalence ranging from 3 % (i.e. ibeA, papGIII) to 87 % (fimH). As expected, the most complex genotypes (four to seven virulence markers) defined the isolates derived from phylogenetic groups B2 and D. ESBL producers were bla CTX-M-15-positive, mostly of phylogroup A (67 %), harboured IncF multireplicon plasmids, and belonged to six sequence types (i.e. ST10, ST131, ST167, ST410, ST540, ST1275). Members of ST10 clonal complex (i.e. ST10, ST167) were the most common. The ST131 isolates belonged to H30 subclone and displayed 74 % similarity at PFGE analysis.
- 650 _2
- $a antibakteriální látky $x farmakologie $7 D000900
- 650 12
- $a bakteriemie $7 D016470
- 650 _2
- $a Escherichia coli $x klasifikace $x účinky léků $x genetika $x izolace a purifikace $7 D004926
- 650 _2
- $a infekce vyvolané Escherichia coli $x mikrobiologie $7 D004927
- 650 _2
- $a genotyp $7 D005838
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a mikrobiální testy citlivosti $7 D008826
- 650 12
- $a molekulární typizace $7 D058889
- 650 _2
- $a multilokusová sekvenční typizace $7 D058885
- 650 _2
- $a fylogeneze $7 D010802
- 650 _2
- $a Rumunsko $7 D012383
- 650 _2
- $a faktory virulence $x genetika $7 D037521
- 650 _2
- $a beta-laktamasy $x genetika $7 D001618
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Papagheorghe, Raluca $u Colţea Clinical Hospital, Bulevardul I.C.Bratianu 1, sector 3, Bucharest, Romania.
- 700 1_
- $a Oprea, Mihaela $u Cantacuzino National Institute of Research-Development for Microbiology and Immunology, Splaiul Independentei 103, sector 5, 050096, Bucharest, Romania.
- 700 1_
- $a Condei, Maria $u Cantacuzino National Institute of Research-Development for Microbiology and Immunology, Splaiul Independentei 103, sector 5, 050096, Bucharest, Romania.
- 700 1_
- $a Strãuţ, Monica $u Cantacuzino National Institute of Research-Development for Microbiology and Immunology, Splaiul Independentei 103, sector 5, 050096, Bucharest, Romania.
- 773 0_
- $w MED00011005 $t Folia microbiologica $x 1874-9356 $g Roč. 61, č. 3 (2016), s. 221-6
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/26452764 $y Pubmed
- 910 __
- $a ABA008 $b online $c sign $y a $z 0
- 990 __
- $a 20170127 $b ABA008
- 991 __
- $a 20170127122402 $b ABA008
- 999 __
- $a ok $b bmc $g 1185135 $s 964967
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2016 $b 61 $c 3 $d 221-6 $e 20151009 $i 1874-9356 $m Folia microbiologica $n Folia microbiol. (Prague) $x MED00011005
- LZP __
- $a Pubmed-20170127