-
Something wrong with this record ?
A novel germline mutation of the SFTPA1 gene in familial interstitial pneumonia
M. Doubková, K. Staňo Kozubík, L. Radová, M. Pešová, J. Trizuljak, K. Pál, K. Svobodová, K. Réblová, H. Svozilová, Z. Vrzalová, Š. Pospíšilová, M. Doubek,
Language English Country England, Great Britain
Document type Journal Article
Grant support
NV16-29447A
MZ0
CEP Register
Digital library NLK
Full text - Article
NLK
Directory of Open Access Journals
from 2014
Free Medical Journals
from 2014
Nature Open Access
from 2014-12-01
PubMed Central
from 2014
Europe PubMed Central
from 2014
ProQuest Central
from 2014-07-01
Open Access Digital Library
from 2014-01-01
Health & Medicine (ProQuest)
from 2014-07-01
ROAD: Directory of Open Access Scholarly Resources
from 2014
Springer Nature OA/Free Journals
from 2014-12-01
- Publication type
- Journal Article MeSH
Different genes related to alveolar stability have been associated with familial interstitial pneumonia (FIP). Here, we report a novel, rare SFTPA1 variant in a family with idiopathic interstitial pneumonia (IIP). We performed whole-exome sequencing on germline DNA samples from four members of one family; three of them showed signs of pulmonary fibrosis (idiopathic interstitial pneumonia) with autosomal-dominant inheritance. A heterozygous single nucleotide variant c.532 G > A in the SFTPA1 gene has been identified. This variant encodes the substitution p.(Val178Met), localized within the carbohydrate recognition domain of surfactant protein A and segregates with the genes causing idiopathic interstitial pneumonia. This rare variant has not been previously reported. We also analyzed the detected sequence variant in the protein structure in silico. The replacement of valine by the larger methionine inside the protein may cause a disruption in the protein structure. The c.532 G > A variant was further validated using Sanger sequencing of the amplicons, confirming the diagnosis in all symptomatic family members. Moreover, this variant was also found by Sanger sequencing in one other symptomatic family member and one young asymptomatic family member. The autosomal-dominant inheritance, the family history of IIP, and the evidence of a mutation occurring in part of the SFTPA1 gene all suggest a novel variant that causes FIP.
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19013272
- 003
- CZ-PrNML
- 005
- 20210203104944.0
- 007
- ta
- 008
- 190405s2019 enk f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1038/s41439-019-0044-z $2 doi
- 035 __
- $a (PubMed)30854216
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a enk
- 100 1_
- $a Doubková, Martina $u 1Department of Pneumology and Phtiseology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 245 12
- $a A novel germline mutation of the SFTPA1 gene in familial interstitial pneumonia / $c M. Doubková, K. Staňo Kozubík, L. Radová, M. Pešová, J. Trizuljak, K. Pál, K. Svobodová, K. Réblová, H. Svozilová, Z. Vrzalová, Š. Pospíšilová, M. Doubek,
- 520 9_
- $a Different genes related to alveolar stability have been associated with familial interstitial pneumonia (FIP). Here, we report a novel, rare SFTPA1 variant in a family with idiopathic interstitial pneumonia (IIP). We performed whole-exome sequencing on germline DNA samples from four members of one family; three of them showed signs of pulmonary fibrosis (idiopathic interstitial pneumonia) with autosomal-dominant inheritance. A heterozygous single nucleotide variant c.532 G > A in the SFTPA1 gene has been identified. This variant encodes the substitution p.(Val178Met), localized within the carbohydrate recognition domain of surfactant protein A and segregates with the genes causing idiopathic interstitial pneumonia. This rare variant has not been previously reported. We also analyzed the detected sequence variant in the protein structure in silico. The replacement of valine by the larger methionine inside the protein may cause a disruption in the protein structure. The c.532 G > A variant was further validated using Sanger sequencing of the amplicons, confirming the diagnosis in all symptomatic family members. Moreover, this variant was also found by Sanger sequencing in one other symptomatic family member and one young asymptomatic family member. The autosomal-dominant inheritance, the family history of IIP, and the evidence of a mutation occurring in part of the SFTPA1 gene all suggest a novel variant that causes FIP.
- 655 _2
- $a časopisecké články $7 D016428
- 700 1_
- $a Staňo Kozubík, Kateřina $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic. 3Department of Internal Medicine, Hematology and Oncology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 700 1_
- $a Radová, Lenka $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
- 700 1_
- $a Pešová, Michaela $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
- 700 1_
- $a Trizuljak, Jakub $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic. 3Department of Internal Medicine, Hematology and Oncology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 700 1_
- $a Pál, Karol $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
- 700 1_
- $a Svobodová, Klára $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
- 700 1_
- $a Réblová, Kamila $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
- 700 1_
- $a Svozilová, Hana $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic. 3Department of Internal Medicine, Hematology and Oncology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 700 1_
- $a Vrzalová, Zuzana $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic. 3Department of Internal Medicine, Hematology and Oncology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 700 1_
- $a Pospíšilová, Šárka $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic. 3Department of Internal Medicine, Hematology and Oncology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 700 1_
- $a Doubek, Michael $u 2Central European Institute of Technology, Masaryk University, Brno, Czech Republic. 3Department of Internal Medicine, Hematology and Oncology, University Hospital and Faculty of Medicine, Brno, Czech Republic.
- 773 0_
- $w MED00198715 $t Human genome variation $x 2054-345X $g Roč. 6, č. - (2019), s. 12
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/30854216 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190405 $b ABA008
- 991 __
- $a 20210203104941 $b ABA008
- 999 __
- $a ind $b bmc $g 1392582 $s 1051577
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2019 $b 6 $c - $d 12 $e 20190305 $i 2054-345X $m Human genome variation $n Hum Genome Var $x MED00198715
- GRA __
- $a NV16-29447A $p MZ0
- LZP __
- $a Pubmed-20190405