-
Je něco špatně v tomto záznamu ?
Neobodonids are dominant kinetoplastids in the global ocean
O. Flegontova, P. Flegontov, S. Malviya, J. Poulain, C. de Vargas, C. Bowler, J. Lukeš, A. Horák,
Jazyk angličtina Země Anglie, Velká Británie
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
29266706
DOI
10.1111/1462-2920.14034
Knihovny.cz E-zdroje
- MeSH
- biodiverzita MeSH
- fylogeneze MeSH
- Kinetoplastida klasifikace genetika MeSH
- oceány a moře MeSH
- plankton genetika MeSH
- ribozomální DNA genetika MeSH
- RNA ribozomální 18S genetika MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- oceány a moře MeSH
Kinetoplastid flagellates comprise basal mostly free-living bodonids and derived obligatory parasitic trypanosomatids, which belong to the best-studied protists. Due to their omnipresence in aquatic environments and soil, the bodonids are of ecological significance. Here, we present the first global survey of marine kinetoplastids and compare it with the strikingly different patterns of abundance and diversity in their sister clade, the diplonemids. Based on analysis of 18S rDNA V9 ribotypes obtained from 124 sites sampled during the Tara Oceans expedition, our results show generally low to moderate abundance and diversity of planktonic kinetoplastids. Although we have identified all major kinetoplastid lineages, 98% of kinetoplastid reads are represented by neobodonids, namely specimens of the Neobodo and Rhynchomonas genera, which make up 59% and 18% of all reads, respectively. Most kinetoplastids have small cell size (0.8-5 µm) and tend to be more abundant in the mesopelagic as compared to the euphotic zone. Some of the most abundant operational taxonomic units have distinct geographical distributions, and three novel putatively parasitic neobodonids were identified, along with their potential hosts.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19028657
- 003
- CZ-PrNML
- 005
- 20190820100058.0
- 007
- ta
- 008
- 190813s2018 enk f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1111/1462-2920.14034 $2 doi
- 035 __
- $a (PubMed)29266706
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a enk
- 100 1_
- $a Flegontova, Olga $u Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic. Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic.
- 245 10
- $a Neobodonids are dominant kinetoplastids in the global ocean / $c O. Flegontova, P. Flegontov, S. Malviya, J. Poulain, C. de Vargas, C. Bowler, J. Lukeš, A. Horák,
- 520 9_
- $a Kinetoplastid flagellates comprise basal mostly free-living bodonids and derived obligatory parasitic trypanosomatids, which belong to the best-studied protists. Due to their omnipresence in aquatic environments and soil, the bodonids are of ecological significance. Here, we present the first global survey of marine kinetoplastids and compare it with the strikingly different patterns of abundance and diversity in their sister clade, the diplonemids. Based on analysis of 18S rDNA V9 ribotypes obtained from 124 sites sampled during the Tara Oceans expedition, our results show generally low to moderate abundance and diversity of planktonic kinetoplastids. Although we have identified all major kinetoplastid lineages, 98% of kinetoplastid reads are represented by neobodonids, namely specimens of the Neobodo and Rhynchomonas genera, which make up 59% and 18% of all reads, respectively. Most kinetoplastids have small cell size (0.8-5 µm) and tend to be more abundant in the mesopelagic as compared to the euphotic zone. Some of the most abundant operational taxonomic units have distinct geographical distributions, and three novel putatively parasitic neobodonids were identified, along with their potential hosts.
- 650 _2
- $a biodiverzita $7 D044822
- 650 _2
- $a ribozomální DNA $x genetika $7 D004275
- 650 _2
- $a Kinetoplastida $x klasifikace $x genetika $7 D016830
- 650 _2
- $a oceány a moře $7 D009792
- 650 _2
- $a fylogeneze $7 D010802
- 650 _2
- $a plankton $x genetika $7 D010933
- 650 _2
- $a RNA ribozomální 18S $x genetika $7 D012337
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Flegontov, Pavel $u Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic. Life Science Research Centre, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.
- 700 1_
- $a Malviya, Shruti $u Simons Centre for the Study of Living Machines, National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore, India. Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024, 46 rue d'Ulm, Paris F-75005, France.
- 700 1_
- $a Poulain, Julie $u CEA - GENOSCOPE - Institut François Jacob, 2 rue Gaston Crémieux, 91057 Evry, France. CNRS, UMR 8030, CP5706, Evry, France. Université d'Evry, UMR 8030, CP5706, Evry, France.
- 700 1_
- $a de Vargas, Colomban $u Station Biologique de Roscoff, Roscoff, France. Sorbonne Universités, Paris, France.
- 700 1_
- $a Bowler, Chris $u Ecole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), CNRS UMR 8197, INSERM U1024, 46 rue d'Ulm, Paris F-75005, France.
- 700 1_
- $a Lukeš, Julius $u Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic. Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic.
- 700 1_
- $a Horák, Aleš $u Institute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic. Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic.
- 773 0_
- $w MED00007220 $t Environmental microbiology $x 1462-2920 $g Roč. 20, č. 2 (2018), s. 878-889
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/29266706 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190813 $b ABA008
- 991 __
- $a 20190820100333 $b ABA008
- 999 __
- $a ok $b bmc $g 1433806 $s 1067117
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2018 $b 20 $c 2 $d 878-889 $e - $i 1462-2920 $m Environmental microbiology $n Environ Microbiol $x MED00007220
- LZP __
- $a Pubmed-20190813