• Something wrong with this record ?

The Legacy of Sexual Ancestors in Phenotypic Variability, Gene Expression, and Homoeolog Regulation of Asexual Hybrids and Polyploids

O. Bartoš, J. Röslein, J. Kotusz, J. Paces, L. Pekárik, M. Petrtýl, K. Halačka, E. Štefková Kašparová, J. Mendel, A. Boroń, D. Juchno, A. Leska, O. Jablonska, V. Benes, M. Šídová, K. Janko,

. 2019 ; 36 (9) : 1902-1920. [pub] 20190901

Language English Country United States

Document type Journal Article, Research Support, Non-U.S. Gov't

Hybridization and polyploidization are important evolutionary processes whose impacts range from the alteration of gene expression and phenotypic variation to the triggering of asexual reproduction. We investigated fishes of the Cobitis taenia-elongatoides hybrid complex, which allowed us to disentangle the direct effects of both processes, due to the co-occurrence of parental species with their diploid and triploid hybrids. Employing morphological, ecological, and RNAseq approaches, we investigated the molecular determinants of hybrid and polyploid forms. In contrast with other studies, hybridization and polyploidy induced relatively very little transgressivity. Instead, Cobitis hybrids appeared intermediate with a clear effect of genomic dosing when triploids expressed higher similarity to the parent contributing two genome sets. This dosage effect was symmetric in the germline (oocyte gene expression), interestingly though, we observed an overall bias toward C. taenia in somatic tissues and traits. At the level of individual genes, expression-level dominance vastly prevailed over additivity or transgressivity. Also, trans-regulation of gene expression was less efficient in diploid hybrids than in triploids, where the expression modulation of homoeologs derived from the "haploid" parent was stronger than those derived from the "diploid" parent. Our findings suggest that the apparent intermediacy of hybrid phenotypes results from the combination of individual genes with dominant expression rather than from simple additivity. The efficiency of cross-talk between trans-regulatory elements further appears dosage dependent. Important effects of polyploidization may thus stem from changes in relative concentrations of trans-regulatory elements and their binding sites between hybridizing genomes. Links between gene regulation and asexuality are discussed.

Department of Zoology Faculty of Biology and Biotechnology University of Warmia and Mazury in Olsztyn Olsztyn Poland

Genomics Core Facility European Molecular Biology Laboratory Heidelberg Germany

Institute of Animal Physiology and Genetics Laboratory of Fish Genetics The Czech Academy of Sciences Libechov Czech Republic

Institute of Animal Physiology and Genetics Laboratory of Fish Genetics The Czech Academy of Sciences Libechov Czech Republic Department of Biology and Ecology Faculty of Science University of Ostrava Ostrava Czech Republic

Institute of Animal Physiology and Genetics Laboratory of Fish Genetics The Czech Academy of Sciences Libechov Czech Republic Department of Zoology and Fisheries Faculty of Agrobiology Food and Natural Resources Czech University of Life Sciences Prague Prague Czech Republic

Institute of Animal Physiology and Genetics Laboratory of Fish Genetics The Czech Academy of Sciences Libechov Czech Republic Department of Zoology Faculty of Science Charles University Prague Czech Republic

Institute of Animal Physiology and Genetics Laboratory of Fish Genetics The Czech Academy of Sciences Libechov Czech Republic Institute of Molecular Genetics Laboratory of Genomics and Bioinformatics The Czech Academy of Sciences Prague Czech Republic

Institute of Biotechnology of the Czech Academy of Sciences BIOCEV Vestec Czech Republic

Institute of Vertebrate Biology Czech Academy of Sciences Brno Czech Republic

Museum of Natural History University of Wroclaw Wroclaw Poland

Plant Science and Biodiversity Center Institute of Botany Slovak Academy of Sciences Bratislava Slovakia Faculty of Education Trnava University Trnava Slovakia

References provided by Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc20006375
003      
CZ-PrNML
005      
20240904122558.0
007      
ta
008      
200511s2019 xxu f 000 0|eng||
009      
AR
024    7_
$a 10.1093/molbev/msz114 $2 doi
035    __
$a (PubMed)31077330
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxu
100    1_
$a Bartoš, Oldřich $u Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, The Czech Academy of Sciences, Libechov, Czech Republic. Department of Zoology, Faculty of Science, Charles University, Prague, Czech Republic. $7 xx0321972
245    14
$a The Legacy of Sexual Ancestors in Phenotypic Variability, Gene Expression, and Homoeolog Regulation of Asexual Hybrids and Polyploids / $c O. Bartoš, J. Röslein, J. Kotusz, J. Paces, L. Pekárik, M. Petrtýl, K. Halačka, E. Štefková Kašparová, J. Mendel, A. Boroń, D. Juchno, A. Leska, O. Jablonska, V. Benes, M. Šídová, K. Janko,
520    9_
$a Hybridization and polyploidization are important evolutionary processes whose impacts range from the alteration of gene expression and phenotypic variation to the triggering of asexual reproduction. We investigated fishes of the Cobitis taenia-elongatoides hybrid complex, which allowed us to disentangle the direct effects of both processes, due to the co-occurrence of parental species with their diploid and triploid hybrids. Employing morphological, ecological, and RNAseq approaches, we investigated the molecular determinants of hybrid and polyploid forms. In contrast with other studies, hybridization and polyploidy induced relatively very little transgressivity. Instead, Cobitis hybrids appeared intermediate with a clear effect of genomic dosing when triploids expressed higher similarity to the parent contributing two genome sets. This dosage effect was symmetric in the germline (oocyte gene expression), interestingly though, we observed an overall bias toward C. taenia in somatic tissues and traits. At the level of individual genes, expression-level dominance vastly prevailed over additivity or transgressivity. Also, trans-regulation of gene expression was less efficient in diploid hybrids than in triploids, where the expression modulation of homoeologs derived from the "haploid" parent was stronger than those derived from the "diploid" parent. Our findings suggest that the apparent intermediacy of hybrid phenotypes results from the combination of individual genes with dominant expression rather than from simple additivity. The efficiency of cross-talk between trans-regulatory elements further appears dosage dependent. Important effects of polyploidization may thus stem from changes in relative concentrations of trans-regulatory elements and their binding sites between hybridizing genomes. Links between gene regulation and asexuality are discussed.
650    _2
$a zvířata $7 D000818
650    _2
$a máloostní $x anatomie a histologie $x genetika $x metabolismus $7 D003531
650    _2
$a ekosystém $7 D017753
650    _2
$a ženské pohlaví $7 D005260
650    12
$a regulace genové exprese $7 D005786
650    12
$a hybridizace genetická $7 D006824
650    _2
$a mužské pohlaví $7 D008297
650    _2
$a fenotyp $7 D010641
650    12
$a polyploidie $7 D011123
650    12
$a nepohlavní rozmnožování $7 D012100
655    _2
$a časopisecké články $7 D016428
655    _2
$a práce podpořená grantem $7 D013485
700    1_
$a Röslein, Jan $u Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, The Czech Academy of Sciences, Libechov, Czech Republic. Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.
700    1_
$a Kotusz, Jan $u Museum of Natural History, University of Wroclaw, Wroclaw, Poland.
700    1_
$a Paces, Jan $u Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, The Czech Academy of Sciences, Libechov, Czech Republic. Institute of Molecular Genetics, Laboratory of Genomics and Bioinformatics, The Czech Academy of Sciences, Prague, Czech Republic.
700    1_
$a Pekárik, Ladislav $u Plant Science and Biodiversity Center, Institute of Botany, Slovak Academy of Sciences, Bratislava, Slovakia. Faculty of Education, Trnava University, Trnava, Slovakia.
700    1_
$a Petrtýl, Miloslav $u Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, The Czech Academy of Sciences, Libechov, Czech Republic. Department of Zoology and Fisheries, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Prague, Czech Republic.
700    1_
$a Halačka, Karel $u Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
700    1_
$a Štefková Kašparová, Eva $u Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, The Czech Academy of Sciences, Libechov, Czech Republic.
700    1_
$a Mendel, Jan $u Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
700    1_
$a Boroń, Alicja $u Department of Zoology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.
700    1_
$a Juchno, Dorota $u Department of Zoology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.
700    1_
$a Leska, Anna $u Department of Zoology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.
700    1_
$a Jablonska, Olga $u Department of Zoology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.
700    1_
$a Benes, Vladimir $u Genomics Core Facility, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
700    1_
$a Šídová, Monika $u Institute of Biotechnology of the Czech Academy of Sciences - BIOCEV, Vestec, Czech Republic.
700    1_
$a Janko, Karel $u Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, The Czech Academy of Sciences, Libechov, Czech Republic. Department of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.
773    0_
$w MED00006601 $t Molecular biology and evolution $x 1537-1719 $g Roč. 36, č. 9 (2019), s. 1902-1920
856    41
$u https://pubmed.ncbi.nlm.nih.gov/31077330 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20200511 $b ABA008
991    __
$a 20240904122554 $b ABA008
999    __
$a ok $b bmc $g 1525233 $s 1096431
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2019 $b 36 $c 9 $d 1902-1920 $e 20190901 $i 1537-1719 $m Molecular biology and evolution $n Mol Biol Evol $x MED00006601
LZP    __
$a Pubmed-20200511

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...