Detail
Článek
Článek online
FT
Medvik - BMČ
  • Je něco špatně v tomto záznamu ?

Microbiological diagnostics of bloodstream infections in Europe-an ESGBIES survey

EA. Idelevich, H. Seifert, M. Sundqvist, L. Scudeller, S. Amit, A. Balode, A. Bilozor, P. Drevinek, Z. Kocak Tufan, A. Koraqi, B. Lamy, I. Mareković, J. Miciuleviciene, M. Müller Premru, A. Pascual, S. Pournaras, V. Saegeman, HC. Schønheyder, J....

. 2019 ; 25 (11) : 1399-1407. [pub] 20190410

Jazyk angličtina Země Velká Británie

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/bmc20006462

OBJECTIVES: High-quality diagnosis of bloodstream infections (BSI) is important for successful patient management. As knowledge on current practices of microbiological BSI diagnostics is limited, this project aimed to assess its current state in European microbiological laboratories. METHODS: We performed an online questionnaire-based cross-sectional survey comprising 34 questions on practices of microbiological BSI diagnostics. The ESCMID Study Group for Bloodstream Infections, Endocarditis and Sepsis (ESGBIES) was the primary platform to engage national coordinators who recruited laboratories within their countries. RESULTS: Responses were received from 209 laboratories in 25 European countries. Although 32.5% (68/209) of laboratories only used the classical processing of positive blood cultures (BC), two-thirds applied rapid technologies. Of laboratories that provided data, 42.2% (78/185) were able to start incubating BC in automated BC incubators around-the-clock, and only 13% (25/192) had established a 24-h service to start immediate processing of positive BC. Only 4.7% (9/190) of laboratories validated and transmitted the results of identification and antimicrobial susceptibility testing (AST) of BC pathogens to clinicians 24 h/day. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry from briefly incubated sub-cultures on solid media was the most commonly used approach to rapid pathogen identification from positive BC, and direct disc diffusion was the most common rapid AST method from positive BC. CONCLUSIONS: Laboratories have started to implement novel technologies for rapid identification and AST for positive BC. However, progress is severely compromised by limited operating hours such that current practice of BC diagnostics in Europe complies only partly with the requirements for optimal BSI management.

Bacteriology Laboratory Division of Infectious Diseases Geneva University Hospitals Geneva Switzerland

Clinical Epidemiology Unit Scientific Direction Fondazione IRCCS Policlinico San Matteo Pavia Fondazione IRCCS Pavia Italy

Clinical Microbiology Laboratory University Hospital Centre 'Mother Theresa' Tirana Albania

Department of Clinical and Molecular Microbiology University Hospital Centre Zagreb University of Zagreb School of Medicine Zagreb Croatia

Department of Clinical Microbiology Aalborg University Hospital Aalborg Denmark

Department of Clinical Microbiology and Infectious Diseases Hadassah Medical Centre Jerusalem Israel

Department of Infection Control and Epidemiology University Hospitals Leuven Leuven Belgium

Department of Infectious Diseases and Centre for Experimental Molecular Medicine Amsterdam UMC location AMC University of Amsterdam Amsterdam the Netherlands

Department of Laboratory Medicine Clinical Microbiology Faculty of Medicine and Health Örebro University Örebro Sweden

Department of Medical Microbiology 2nd Faculty of Medicine Charles University and Motol University Hospital Prague Czech Republic

Department of Medical Microbiology Faculty of Medicine Medical University of Sofia Sofia Bulgaria

Department of Microbiology University Hospitals Plymouth NHS Trust Plymouth UK

Division of Epidemiology Tel Aviv Sourasky Medical Centre Tel Aviv Israel

German Centre for Infection Research Partner Site Bonn Cologne Cologne Germany

Infectious Diseases and Clinical Microbiology Department Medical School of Ankara Yildirim Beyazit University Ankara Turkey

Institute for Medical Microbiology Immunology and Hygiene University of Cologne Cologne Germany

Institute of Medical Microbiology University Hospital Münster Münster Germany

Institute of Microbiology and Immunology Faculty of Medicine University of Ljubljana Ljubljana Slovenia

Laboratory of Clinical Microbiology Attikon Hospital National and Kapodistrian University of Athens Athens Greece

Laboratory of Clinical Microbiology Centre Hospitalier Universitaire de Nice Université Côte d'Azur INSERM U1065 Nice France

Microbiology Laboratory Diagnostic Clinic East Tallinn Central Hospital Tallinn Estonia

National Medicines Institute Warsaw Poland

Pauls Stradins Clinical University Hospital Riga Latvia

Unidad de Enfermedades Infecciosas Microbiologia y Medicina Preventiva Hospital Universitario Virgen Macarena Departamento de Microbiología Universidad de Sevilla Instituto de Biomedicina de Sevilla Sevilla Spain

Vilnius City Clinical Hospital Vilnius Lithuania

Citace poskytuje Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc20006462
003      
CZ-PrNML
005      
20200525092233.0
007      
ta
008      
200511s2019 xxk f 000 0|eng||
009      
AR
024    7_
$a 10.1016/j.cmi.2019.03.024 $2 doi
035    __
$a (PubMed)30980927
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxk
100    1_
$a Idelevich, E A $u Institute of Medical Microbiology, University Hospital Münster, Münster, Germany.
245    10
$a Microbiological diagnostics of bloodstream infections in Europe-an ESGBIES survey / $c EA. Idelevich, H. Seifert, M. Sundqvist, L. Scudeller, S. Amit, A. Balode, A. Bilozor, P. Drevinek, Z. Kocak Tufan, A. Koraqi, B. Lamy, I. Mareković, J. Miciuleviciene, M. Müller Premru, A. Pascual, S. Pournaras, V. Saegeman, HC. Schønheyder, J. Schrenzel, T. Strateva, R. Tilley, WJ. Wiersinga, D. Zabicka, Y. Carmeli, K. Becker, ESCMID Study Group for Bloodstream Infections, Endocarditis and Sepsis (ESGBIES),
520    9_
$a OBJECTIVES: High-quality diagnosis of bloodstream infections (BSI) is important for successful patient management. As knowledge on current practices of microbiological BSI diagnostics is limited, this project aimed to assess its current state in European microbiological laboratories. METHODS: We performed an online questionnaire-based cross-sectional survey comprising 34 questions on practices of microbiological BSI diagnostics. The ESCMID Study Group for Bloodstream Infections, Endocarditis and Sepsis (ESGBIES) was the primary platform to engage national coordinators who recruited laboratories within their countries. RESULTS: Responses were received from 209 laboratories in 25 European countries. Although 32.5% (68/209) of laboratories only used the classical processing of positive blood cultures (BC), two-thirds applied rapid technologies. Of laboratories that provided data, 42.2% (78/185) were able to start incubating BC in automated BC incubators around-the-clock, and only 13% (25/192) had established a 24-h service to start immediate processing of positive BC. Only 4.7% (9/190) of laboratories validated and transmitted the results of identification and antimicrobial susceptibility testing (AST) of BC pathogens to clinicians 24 h/day. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry from briefly incubated sub-cultures on solid media was the most commonly used approach to rapid pathogen identification from positive BC, and direct disc diffusion was the most common rapid AST method from positive BC. CONCLUSIONS: Laboratories have started to implement novel technologies for rapid identification and AST for positive BC. However, progress is severely compromised by limited operating hours such that current practice of BC diagnostics in Europe complies only partly with the requirements for optimal BSI management.
650    _2
$a průřezové studie $7 D003430
650    _2
$a diagnostické testy rutinní $x metody $7 D003955
650    _2
$a lidé $7 D006801
650    _2
$a mikrobiologické techniky $x metody $7 D008828
650    _2
$a diagnostické techniky molekulární $x metody $7 D025202
650    _2
$a sepse $x diagnóza $7 D018805
651    _2
$a Evropa $7 D005060
655    _2
$a časopisecké články $7 D016428
700    1_
$a Seifert, H $u Institute for Medical Microbiology, Immunology and Hygiene, University of Cologne, Cologne, Germany; German Centre for Infection Research, Partner Site Bonn-Cologne, Cologne, Germany.
700    1_
$a Sundqvist, M $u Department of Laboratory Medicine, Clinical Microbiology, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.
700    1_
$a Scudeller, L $u Clinical Epidemiology Unit, Scientific Direction, Fondazione IRCCS, Policlinico San Matteo Pavia Fondazione IRCCS, Pavia, Italy.
700    1_
$a Amit, S $u Department of Clinical Microbiology and Infectious Diseases, Hadassah Medical Centre, Jerusalem, Israel.
700    1_
$a Balode, A $u Pauls Stradins Clinical University Hospital, Riga, Latvia.
700    1_
$a Bilozor, A $u Microbiology Laboratory, Diagnostic Clinic, East-Tallinn Central Hospital, Tallinn, Estonia.
700    1_
$a Drevinek, P $u Department of Medical Microbiology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czech Republic.
700    1_
$a Kocak Tufan, Z $u Infectious Diseases and Clinical Microbiology Department, Medical School of Ankara Yildirim Beyazit University, Ankara, Turkey.
700    1_
$a Koraqi, A $u Clinical Microbiology Laboratory, University Hospital Centre 'Mother Theresa', Tirana, Albania.
700    1_
$a Lamy, B $u Laboratory of Clinical Microbiology, Centre Hospitalier Universitaire de Nice, Université Côte d'Azur, INSERM U1065 (C3M), Nice, France.
700    1_
$a Mareković, I $u Department of Clinical and Molecular Microbiology, University Hospital Centre Zagreb, University of Zagreb School of Medicine, Zagreb, Croatia.
700    1_
$a Miciuleviciene, J $u Vilnius City Clinical Hospital, Vilnius, Lithuania.
700    1_
$a Müller Premru, M $u Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.
700    1_
$a Pascual, A $u Unidad de Enfermedades Infecciosas, Microbiologia y Medicina Preventiva, Hospital Universitario Virgen Macarena, Departamento de Microbiología, Universidad de Sevilla, Instituto de Biomedicina de Sevilla (IBiS), Sevilla, Spain.
700    1_
$a Pournaras, S $u Laboratory of Clinical Microbiology, Attikon Hospital, National and Kapodistrian University of Athens, Athens, Greece.
700    1_
$a Saegeman, V $u Department of Infection Control and Epidemiology, University Hospitals Leuven, Leuven, Belgium.
700    1_
$a Schønheyder, H C $u Department of Clinical Microbiology, Aalborg University Hospital, Aalborg, Denmark.
700    1_
$a Schrenzel, J $u Bacteriology Laboratory, Division of Infectious Diseases, Geneva University Hospitals, Geneva, Switzerland.
700    1_
$a Strateva, T $u Department of Medical Microbiology, Faculty of Medicine, Medical University of Sofia, Sofia, Bulgaria.
700    1_
$a Tilley, R $u Department of Microbiology, University Hospitals Plymouth NHS Trust, Plymouth, UK.
700    1_
$a Wiersinga, W J $u Department of Infectious Diseases and Centre for Experimental Molecular Medicine, Amsterdam UMC, location AMC, University of Amsterdam, Amsterdam, the Netherlands.
700    1_
$a Zabicka, D $u National Medicines Institute, Warsaw, Poland.
700    1_
$a Carmeli, Y $u Division of Epidemiology, Tel Aviv Sourasky Medical Centre, Tel Aviv, Israel.
700    1_
$a Becker, K $u Institute of Medical Microbiology, University Hospital Münster, Münster, Germany. Electronic address: kbecker@uni-muenster.de.
710    2_
$a ESCMID Study Group for Bloodstream Infections, Endocarditis and Sepsis (ESGBIES)
773    0_
$w MED00001139 $t Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases $x 1469-0691 $g Roč. 25, č. 11 (2019), s. 1399-1407
856    41
$u https://pubmed.ncbi.nlm.nih.gov/30980927 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20200511 $b ABA008
991    __
$a 20200525092234 $b ABA008
999    __
$a ok $b bmc $g 1525320 $s 1096518
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2019 $b 25 $c 11 $d 1399-1407 $e 20190410 $i 1469-0691 $m Clinical microbiology and infection $n Clin Microbiol Infect $x MED00001139
LZP    __
$a Pubmed-20200511

Najít záznam

Citační ukazatele

Pouze přihlášení uživatelé

Možnosti archivace

Nahrávání dat ...