• Je něco špatně v tomto záznamu ?

Depletion of KNL2 Results in Altered Expression of Genes Involved in Regulation of the Cell Cycle, Transcription, and Development in Arabidopsis

A. Boudichevskaia, A. Houben, A. Fiebig, K. Prochazkova, A. Pecinka, I. Lermontova,

. 2019 ; 20 (22) : . [pub] 20191115

Jazyk angličtina Země Švýcarsko

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/bmc20023482

Grantová podpora
"MSCAfellow@MUNI" (No. CZ.02.2.69/0.0/0.0/17_050/0008496 European Regional Development Fund-Project
LE2299/1-2 DFG CEP - Centrální evidence projektů
HO 1779/30-1 DFG CEP - Centrální evidence projektů
19-13848S Czech grant agency
No. CZ.02.1.01/0.0/0.0/16_019/0000827 Czech grant agency

Centromeres contain specialized nucleosomes at which histone H3 is partially replaced by the centromeric histone H3 variant cenH3 that is required for the assembly, maintenance, and proper function of kinetochores during mitotic and meiotic divisions. Previously, we identified a KINETOCHORE NULL 2 (KNL2) of Arabidopsis thaliana that is involved in the licensing of centromeres for the cenH3 recruitment. We also demonstrated that a knockout mutant for KNL2 shows mitotic and meiotic defects, slower development, reduced growth rate, and fertility. To analyze an effect of KNL2 mutation on global gene transcription of Arabidopsis, we performed RNA-sequencing experiments using seedling and flower bud tissues of knl2 and wild-type plants. The transcriptome data analysis revealed a high number of differentially expressed genes (DEGs) in knl2 plants. The set was enriched in genes involved in the regulation of the cell cycle, transcription, development, and DNA damage repair. In addition to comprehensive information regarding the effects of KNL2 mutation on the global gene expression, physiological changes in plants are also presented, which provides an integrated understanding of the critical role played by KNL2 in plant growth and development.

Citace poskytuje Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc20023482
003      
CZ-PrNML
005      
20201214130144.0
007      
ta
008      
201125s2019 sz f 000 0|eng||
009      
AR
024    7_
$a 10.3390/ijms20225726 $2 doi
035    __
$a (PubMed)31731608
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a sz
100    1_
$a Boudichevskaia, Anastassia $u Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstrasse 3, D-06466 Seeland, Germany.
245    10
$a Depletion of KNL2 Results in Altered Expression of Genes Involved in Regulation of the Cell Cycle, Transcription, and Development in Arabidopsis / $c A. Boudichevskaia, A. Houben, A. Fiebig, K. Prochazkova, A. Pecinka, I. Lermontova,
520    9_
$a Centromeres contain specialized nucleosomes at which histone H3 is partially replaced by the centromeric histone H3 variant cenH3 that is required for the assembly, maintenance, and proper function of kinetochores during mitotic and meiotic divisions. Previously, we identified a KINETOCHORE NULL 2 (KNL2) of Arabidopsis thaliana that is involved in the licensing of centromeres for the cenH3 recruitment. We also demonstrated that a knockout mutant for KNL2 shows mitotic and meiotic defects, slower development, reduced growth rate, and fertility. To analyze an effect of KNL2 mutation on global gene transcription of Arabidopsis, we performed RNA-sequencing experiments using seedling and flower bud tissues of knl2 and wild-type plants. The transcriptome data analysis revealed a high number of differentially expressed genes (DEGs) in knl2 plants. The set was enriched in genes involved in the regulation of the cell cycle, transcription, development, and DNA damage repair. In addition to comprehensive information regarding the effects of KNL2 mutation on the global gene expression, physiological changes in plants are also presented, which provides an integrated understanding of the critical role played by KNL2 in plant growth and development.
650    _2
$a Arabidopsis $x genetika $x metabolismus $7 D017360
650    _2
$a proteiny huseníčku $x genetika $x metabolismus $7 D029681
650    _2
$a buněčný cyklus $x genetika $x fyziologie $7 D002453
650    _2
$a centromera $x genetika $x metabolismus $7 D002503
650    _2
$a DNA vazebné proteiny $x genetika $x metabolismus $7 D004268
650    _2
$a kinetochory $x metabolismus $7 D018386
655    _2
$a časopisecké články $7 D016428
700    1_
$a Houben, Andreas $u Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstrasse 3, D-06466 Seeland, Germany.
700    1_
$a Fiebig, Anne $u Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstrasse 3, D-06466 Seeland, Germany.
700    1_
$a Prochazkova, Klara $u Institute of Experimental Botany, Czech Acad Sci, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Šlechtitelů 31, CZ-77900 Olomouc, Czech Republic.
700    1_
$a Pecinka, Ales $u Institute of Experimental Botany, Czech Acad Sci, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Šlechtitelů 31, CZ-77900 Olomouc, Czech Republic.
700    1_
$a Lermontova, Inna $u Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstrasse 3, D-06466 Seeland, Germany. Mendel Centre for Plant Genomics and Proteomics, CEITEC, Masaryk University, Brno CZ-62500, Czech Republic.
773    0_
$w MED00176142 $t International journal of molecular sciences $x 1422-0067 $g Roč. 20, č. 22 (2019)
856    41
$u https://pubmed.ncbi.nlm.nih.gov/31731608 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20201125 $b ABA008
991    __
$a 20201214130143 $b ABA008
999    __
$a ok $b bmc $g 1595801 $s 1114158
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2019 $b 20 $c 22 $e 20191115 $i 1422-0067 $m International journal of molecular sciences $n Int J Mol Sci $x MED00176142
GRA    __
$a "MSCAfellow@MUNI" (No. CZ.02.2.69/0.0/0.0/17_050/0008496 $p European Regional Development Fund-Project
GRA    __
$a LE2299/1-2 $p DFG
GRA    __
$a HO 1779/30-1 $p DFG
GRA    __
$a 19-13848S $p Czech grant agency
GRA    __
$a No. CZ.02.1.01/0.0/0.0/16_019/0000827 $p Czech grant agency
LZP    __
$a Pubmed-20201125

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...