-
Je něco špatně v tomto záznamu ?
CE determination of the thermodynamic pKa values and limiting ionic mobilities of 14 low molecular mass UV absorbing ampholytes for accurate characterization of the pH gradient in carrier ampholytes-based IEF and its numeric simulation
M. Ansorge, B. Gaš, M. Boublík, M. Malý, J. Šteflová, V. Hruška, G. Vigh
Jazyk angličtina Země Německo
Typ dokumentu časopisecké články, práce podpořená grantem
Grantová podpora
Research Gift No. 4135
Agilent Foundation - International
Grant No. 18-11776S
Grantová Agentura České Republiky - International
PubMed
31721266
DOI
10.1002/elps.201900381
Knihovny.cz E-zdroje
- MeSH
- amfolytové směsi chemie MeSH
- elektroforéza kapilární metody MeSH
- isoelektrická fokusace metody MeSH
- koncentrace vodíkových iontů MeSH
- osmolární koncentrace MeSH
- počítačová simulace MeSH
- pufry MeSH
- termodynamika MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Fourteen low molecular mass UV absorbing ampholytes containing 1 or 2 weakly acidic and 1 or 2 weakly basic functional groups that best satisfy Rilbe's requirement for being good carrier ampholytes (ΔpKa = pKamonoanion - pKamonocation < 2) were selected from a large group of commercially readily available ampholytes in a computational study using two software packages (ChemSketch and SPARC). Their electrophoretic mobilities were measured in 10 mM ionic strength BGEs covering the 2 < pH < 12 range. Using our Debye-Hückel and Onsager-Fuoss laws-based new software, AnglerFish (freeware, https://echmet.natur.cuni.cz/software/download), the effective mobilities were recalculated to zero ionic strength from which the thermodynamic pKa values and limiting ionic mobilities of the ampholytes were directly calculated by Henderson-Hasselbalch equation-type nonlinear regression. The tabulated thermodynamic pKa values and limiting ionic mobilities of these ampholytes (pI markers) facilitate both the overall and the narrow-segment characterization of the pH gradients obtained in IEF in order to mitigate the errors of analyte ampholyte pI assignments caused by the usual (but rarely proven) assumption of pH gradient linearity. These thermodynamic pKa and limiting mobility values also enable the reality-based numeric simulation of the IEF process using, for example, Simul (freeware, https://echmet.natur.cuni.cz/software/download).
Agilent Technologies Deutschland GmbH Waldbronn Germany
Chemistry Department Texas A and M University College Station TX USA
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc21012740
- 003
- CZ-PrNML
- 005
- 20210507102018.0
- 007
- ta
- 008
- 210420s2020 gw f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1002/elps.201900381 $2 doi
- 035 __
- $a (PubMed)31721266
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a gw
- 100 1_
- $a Ansorge, Martin $u Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Prague, Czech Republic
- 245 10
- $a CE determination of the thermodynamic pKa values and limiting ionic mobilities of 14 low molecular mass UV absorbing ampholytes for accurate characterization of the pH gradient in carrier ampholytes-based IEF and its numeric simulation / $c M. Ansorge, B. Gaš, M. Boublík, M. Malý, J. Šteflová, V. Hruška, G. Vigh
- 520 9_
- $a Fourteen low molecular mass UV absorbing ampholytes containing 1 or 2 weakly acidic and 1 or 2 weakly basic functional groups that best satisfy Rilbe's requirement for being good carrier ampholytes (ΔpKa = pKamonoanion - pKamonocation < 2) were selected from a large group of commercially readily available ampholytes in a computational study using two software packages (ChemSketch and SPARC). Their electrophoretic mobilities were measured in 10 mM ionic strength BGEs covering the 2 < pH < 12 range. Using our Debye-Hückel and Onsager-Fuoss laws-based new software, AnglerFish (freeware, https://echmet.natur.cuni.cz/software/download), the effective mobilities were recalculated to zero ionic strength from which the thermodynamic pKa values and limiting ionic mobilities of the ampholytes were directly calculated by Henderson-Hasselbalch equation-type nonlinear regression. The tabulated thermodynamic pKa values and limiting ionic mobilities of these ampholytes (pI markers) facilitate both the overall and the narrow-segment characterization of the pH gradients obtained in IEF in order to mitigate the errors of analyte ampholyte pI assignments caused by the usual (but rarely proven) assumption of pH gradient linearity. These thermodynamic pKa and limiting mobility values also enable the reality-based numeric simulation of the IEF process using, for example, Simul (freeware, https://echmet.natur.cuni.cz/software/download).
- 650 _2
- $a amfolytové směsi $x chemie $7 D000665
- 650 _2
- $a pufry $7 D002021
- 650 _2
- $a počítačová simulace $7 D003198
- 650 _2
- $a elektroforéza kapilární $x metody $7 D019075
- 650 _2
- $a koncentrace vodíkových iontů $7 D006863
- 650 _2
- $a isoelektrická fokusace $x metody $7 D007525
- 650 _2
- $a osmolární koncentrace $7 D009994
- 650 _2
- $a termodynamika $7 D013816
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Gaš, Bohuslav $u Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Prague, Czech Republic
- 700 1_
- $a Boublík, Milan $u Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Prague, Czech Republic
- 700 1_
- $a Malý, Michal $u Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Prague, Czech Republic
- 700 1_
- $a Šteflová, Jana $u Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Prague, Czech Republic $u Agilent Technologies Deutschland GmbH, Waldbronn, Germany
- 700 1_
- $a Hruška, Vlastimil $u Agilent Technologies Deutschland GmbH, Waldbronn, Germany
- 700 1_
- $a Vigh, Gyula $u Chemistry Department, Texas A&M University, College Station, TX, USA
- 773 0_
- $w MED00001508 $t Electrophoresis $x 1522-2683 $g Roč. 41, č. 7-8 (2020), s. 514-522
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/31721266 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y p $z 0
- 990 __
- $a 20210420 $b ABA008
- 991 __
- $a 20210507102018 $b ABA008
- 999 __
- $a ok $b bmc $g 1650992 $s 1133119
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2020 $b 41 $c 7-8 $d 514-522 $e 20191121 $i 1522-2683 $m Electrophoresis $n Electrophoresis $x MED00001508
- GRA __
- $a Research Gift No. 4135 $p Agilent Foundation $2 International
- GRA __
- $a Grant No. 18-11776S $p Grantová Agentura České Republiky $2 International
- LZP __
- $a Pubmed-20210420