• This record comes from PubMed

Complete Genome Sequence of Bacteriophage SEN8, a Temperate Phage Isolated from Salmonella enterica subsp. salamae

. 2017 May 11 ; 5 (19) : . [epub] 20170511

Status PubMed-not-MEDLINE Language English Country United States Media electronic

Document type Journal Article

A temperate phage, SEN8, having a broad activity against pathogenic Salmonella serovars, was isolated from Salmonella enterica subsp. salamae strain Sen8. The complete genome sequence of phage SEN8 was determined (35,203 bp) and showed relatedness to P2-like phages (Salmonella phages Fels-2 and RE-2010).

See more in PubMed

European Food Safety Authority, European Centre for Disease Prevention and Control 2015. The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2014. EFSA J 13:e4329. doi:10.2903/j.efsa.2015.4329. PubMed DOI PMC

Abbott SL, Ni FCY, Janda JM. 2012. Increase in extraintestinal infections caused by Salmonella enterica subspecies II–IV. Emerg Infect Dis 18:637–639. doi:10.3201/eid1804.111386. PubMed DOI PMC

Switt AI, Sulakvelidze A, Wiedmann M, Kropinski AM, Wishart DS, Poppe C, Liang Y. 2015. Salmonella phages and prophages: genomics, taxonomy, and applied aspects. Methods Mol Biol 1225:237–287. doi:10.1007/978-1-4939-1625-2_15. PubMed DOI

Mikalová L, Bosák J, Hříbková H, Dědičová D, Benada O, Šmarda J, Šmajs D. 2017. Novel temperate phages of Salmonella enterica subsp. salamae and subsp. diarizonae and their activity against pathogenic S. enterica subsp. enterica isolates. PLoS One 12:e0170734. doi:10.1371/journal.pone.0170734. PubMed DOI PMC

Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30:2114–2120. doi:10.1093/bioinformatics/btu170. PubMed DOI PMC

Peng Y, Leung HC, Yiu SM, Chin FY. 2012. IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28:1420–1428. doi:10.1093/bioinformatics/bts174. PubMed DOI

Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75. doi:10.1186/1471-2164-9-75. PubMed DOI PMC

Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403–410. doi:10.1016/S0022-2836(05)80360-2. PubMed DOI

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...