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Characterization and genomic analysis of highly efficient thermotolerant oil-degrading bacterium Gordonia sp. 1D

Delegan, Yanina A
Author Delegan, Yanina A ORCID FSBIS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 5 Prospekt Nauki, Pushchino, 142290, Russia. mewgia@ya.ru
Valentovich, Leonid N
Author Valentovich, Leonid N Institute of Microbiology, National Academy of Sciences of Belarus, 2 Kuprevich str, 220141, Minsk, Belarus
Shafieva, Samira M
Author Shafieva, Samira M Baku State University, 23 Academic Zahid Khalilov str, AZ 1148, Baku, Azerbaijan
Ganbarov, Khudaverdi G
Author Ganbarov, Khudaverdi G Baku State University, 23 Academic Zahid Khalilov str, AZ 1148, Baku, Azerbaijan
Filonov, Andrey E
Author Filonov, Andrey E FSBIS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 5 Prospekt Nauki, Pushchino, 142290, Russia
Vainstein, Mikhail B
Author Vainstein, Mikhail B FSBIS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 5 Prospekt Nauki, Pushchino, 142290, Russia

Folia microbiologica. 2019 Jan ; 64 (1) : 41-48. [epub] 20180627

Folia Microbiol (Praha)
ISSN 1874-9356 | 0015-5632
Source

Language English Country United States Media print-electronic

Document type Journal Article

Persistent link https://www.medvik.cz/link/pmid29951843

Grant support
18-34-00329 mol_a Russian Foundation for Basic Research

PubMed 29951843
DOI 10.1007/s12223-018-0623-2
PII: 10.1007/s12223-018-0623-2
Knihovny.cz E-resources

MeSH
Genes, Bacterial MeSH
Biodegradation, Environmental MeSH
Phylogeny MeSH
Genome, Bacterial genetics MeSH
Gordonia Bacterium classification genetics metabolism physiology MeSH
Multigene Family MeSH
Soil Microbiology MeSH
RNA, Ribosomal, 16S genetics MeSH
Petroleum metabolism MeSH
Sequence Analysis, DNA MeSH
Substrate Specificity MeSH
Thermotolerance * MeSH
Publication type
Journal Article MeSH
Names of Substances
RNA, Ribosomal, 16S MeSH
Petroleum MeSH

A thermotolerant bacterial strain 1D isolated from refinery oil-contaminated soil was identified as Gordonia sp. based on the analysis of 16S rRNA and gyrB gene sequences. The strain was found to utilize crude oil, diesel fuel, and a wide spectrum of alkanes at temperatures up to 50 °C. Strain 1D is the first representative of Gordonia amicalis capable of utilizing alkanes of chain length up to С36 at a temperature of 45-50 °C. The degree of crude oil degradation by Gordonia sp. 1D at 45 °C was 38% in liquid medium and 40% in soil (with regard to abiotic loss). There are no examples of so effective hydrocarbon-oxidizing thermotolerant Gordonia in the world literature. The 1D genome analysis revealed the presence of two alkane hydroxylase gene clusters, genes of dibenzothiophene cleavage, and the cleavage of salicylate and gentisate - naphthalene metabolism intermediates. The highly efficient thermotolerant strain Gordonia sp. 1D can be used in remediation of oil-contaminated soils in hot climates.

Baku State University 23 Academic Zahid Khalilov str AZ 1148 Baku Azerbaijan

FSBIS G K Skryabin Institute of Biochemistry and Physiology of Microorganisms Russian Academy of Sciences 5 Prospekt Nauki Pushchino 142290 Russia

Institute of Microbiology National Academy of Sciences of Belarus 2 Kuprevich str 220141 Minsk Belarus

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