Phylogenetic relationships of philometrid nematodes (Philometridae Baylis & Daubney, 1926) inferred from 18S rRNA, with molecular characterisation of recently described species
Jazyk angličtina Země Německo Médium print-electronic
Typ dokumentu časopisecké články
Grantová podpora
A512-828-xxx-66770
Charles Sturt University
PubMed
34825260
DOI
10.1007/s00436-021-07373-8
PII: 10.1007/s00436-021-07373-8
Knihovny.cz E-zdroje
- Klíčová slova
- Fish parasites, Molecular, Philometridae, Phylogeny,
- MeSH
- Dracunculoidea * MeSH
- fylogeneze MeSH
- nemoci ryb * MeSH
- RNA ribozomální 18S MeSH
- ryby MeSH
- zvířata MeSH
- Check Tag
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- RNA ribozomální 18S MeSH
Nematodes of the family Philometridae Baylis & Daubney, 1926 (Dracunculoidea Stiles, 1907) are generally poorly known, and there are many taxonomic issues within the family. Philometrids are parasites of fish and are found in various locations throughout the host, including within the subcutaneous tissues and musculature, the abdominal cavity and gonads; vast sexual dimorphism often means the males are not collected, leading to many species being described solely on female characteristics. Although there have been a number of studies utilising molecular data, the vast majority of species are yet to be sequenced. This study undertook genetic sequencing of 15 recently described species of philometrids across 4 genera, many of which were from specimens collected from waters off Australia. All of the sequences obtained were closely related with representatives of the family Philometridae. Species were found to be distributed in the phylogenetic trees within 4 clades based on a combination of site of infection within the host and host habitat. Family of host and geographical location was not as important for position within the trees. Clade A contained philometrids collected from the abdominal cavities and head tissues of South American freshwater fish. Clade B contained philometrids primarily from the abdominal cavities of freshwater European cyprinids. Clade C contained philometrids primarily from the ovaries of marine fish. Clade D contained philometrids from the body tissues of marine and freshwater fish. The potential co-evolutionary patterns between philometrids and their fish hosts are highlighted as an area of future research. This research also highlighted the importance of correct identification of any sequenced specimen.
Zobrazit více v PubMed
Abe N, Aono S, Baba T (2019) Site of infection and genetic analysis of Philometroides branchiostegi-like nematode found in horsehead tilefish Branchiostegus japonicus. Nippon Suisan Gakkaishi 85:64–66
Anderson R (1992) Nematode parasites of vertebrates: their development and transmission. CAB International, Wallingford
Černotíková E, Horák A, Moravec F (2011) Phylogenetic relationships of some spirurine nematodes (Nematoda: Chromadorea: Rhabditida: Spirurina) parasitic in fishes inferred from SSU rRNA gene sequences. Folia Parasitol 58:135–148
Darriba D, Taboada G, Doallo R, Posada D (2012) jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9:772 PubMed PMC
Dennis M, Yeow J, Nicolaci B, Sample S, Freeman M (2020) Meningitis associated with dracunculoid nematodes in a spotted eagle ray (Aetobatus narinari). J Fish Dis 43:711–713 PubMed
Froese R, Pauly D (2021) FishBase [Online]. Available: www.fishbase.org . Accessed 14 Apr 2021
Genc E, Keskin E (2012) Philometra lateolabracis (Nematoda: Philometridae) in Epinephelus costae (Osteichthyes, Serranidae): first molecular identification of the histozoic parasite from Iskenderun Bay, northeast Mediterranean Sea. World Aquaculture Society: AQUA 2012.
Hall T (1999) BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
Hoang D, Chernomor O, Von Haeseler A, Minh B, Vinh L (2018) UFBoot2: Improving the ultrafast bootstrap approximation. Mol Biol Evol 35:518–522 PubMed
Hughes LC, Orti G, Huang Y, Sun Y, Baldwin CC, Thompson AW, Arcila D, Betancur R, Li C, Becker L, Bellora N, Zhao X, Li X, Wang M, Fang C, Xie B, Zhou Z, Huang H, Chen S, Venkatesh B, Shi Q (2018) Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data. Proc Natl Acad Sci 115:6249–6254 PubMed PMC
Iwaki T, Tamai K, Ohimoto K, Iwahashi Y, Waki T, Kawano F, Ogawa K (2020) New records of Philometra pellucida (Jägerskiöld, 1893) (Nematoda: Philometridae) from the body cavity of Arothron mappa (Lesson) and Arothron nigropunctatus (Bloch et Schneider) reared in aquariums, with synonymisation of Philometra robusta Moravec, Möller et Heeger, 1992. Folia Parasitol 67:025
Katoh K, Rozewicki J, Yamada KD (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform 20:1160–1166 PubMed
Littlewood D, Olson P (2001) Small subunit rDNA and the Platyhelminthes: signal, noise, conflict and compromise. In: Littlewood D, Bray R (eds) Interrelationships of the Platyhelminthes. Taylor & Francis, London
Moravec F (2004) Some aspects of the taxonomy and biology of dracunculoid nematodes parasitic in fishes: a review. Folia Parasitol 51:1–13
Moravec F (2006) Dracunculoid and Anguillicoloid Nematodes Parasitic in Vertebrates. Academia, Ceske Budejovice
Moravec F, De Buron I (2009) New data on three gonad-infecting species of Philometra (Nematoda, Philometridae) from estuarine fishes in South Carolina, USA. Acta Parasitol 54:244–252
Moravec F, De Buron I (2013) A synthesis of our current knowledge of philometrid nematodes, a group of increasingly important fish parasites. Folia Parasitol 60:81–101
Moravec F, Barton D (2015) Two gonad-infecting species of Philometra (Nematoda: Philometridae) from marine fishes off the northern coast of Australia. Parasite 22:4 PubMed PMC
Moravec F, Diggles B (2015) Philometra mirabilis sp. n. (Nematoda: Philometridae), a new gonad-infecting parasite from the freshwater fish Cichla mirianae (Cichlidae) in Brazilian Amazon. Parasitol Res 114:1929–1932 PubMed
Moravec F, Tedesco P (2015) Redescription of Philometra globiceps (Rudolphi, 1819) (Nematoda: Philometridae), the type species of Philometra Costa, 1845, including the first data obtained by SEM. Parasitol Res 114:4413–4420 PubMed
Moravec F, Barton D (2016) New tissue-dwelling species of Philometra Costa, 1845 and Philometroides Yamaguti, 1935 (Nematoda: Philometridae) from marine perciform fishes off the northern coast of Australia. Syst Parasitol 93:623–637 PubMed
Moravec F, Barton D (2018) New records of philometrids (Nematoda: Philometridae) from marine fishes off Australia, including description of four new species and erection of Digitiphilometroides gen. n. Folia Parasitologica 65:005
Moravec F, Scholz T, Kuchta R, Dyková I, Posel P (2006) New data on the morphology of Nilonema senticosum (Nematoda, Phiometridae), a parasite of Arapaima gigas (Pisces), with notes on another philometrid, Alinema amazonicum, in Peru. Acta Parasitol 51:279–285
Moravec F, Bakenhaster M, de Buron I (2013) A new gonad-infecting species of Philometra (Nematoda: Philometridae) from the Atlantic Spanish mackerel Scomberomorus maculatus (Scombridae) off the Atlantic coast of Florida and South Carolina. J Parasitol 99:290–296 PubMed
Moravec F, Ali A, Abed J, Shaker S (2016a) New records of philometrids (Nematoda: Philometridae) from marine fishes off Iraq, with the erection of two new species and the first description of the male of Philometroides eleutheronemae Moravec & Manoharan, 2013. Syst Parasitol 93:129–144 PubMed
Moravec F, Chaabane A, Neifar L, Gey D, Justine J-L (2016b) Descriptions of Philometra aenei n. sp. and P. tunisiensis n. sp. (Nematoda: Philometridae) from Epinephelus spp. off Tunisia confirm a high degree of host specificity of gonad-infecting species of Philometra Costa, 1845 in groupers (Serranidae). Syst Parasitol 93:115–128 PubMed
Moravec F, Cuttmore S, Yong R-Y (2018) Redescription of Philometra pellucida (Jagerskiold, 1893) (Nematoda: Philometridae) parasitic in the abdominal cavity of the blackspotted puffer Arothron nigropunctatus (Bloch & Schneider) (Teleostei: Tetraodontidae) off Australia and Japan. Syst Parasitol 95:665–671 PubMed
Moravec F, Bakenhaster M, Seyoum S, Tringali M (2021a) Morphological and genetic description of two new species of philometrid nematodes (Philometridae) parasitic in needlefishes (Belonidae) from estuaries of Florida, USA. Folia Parasitol 68:008
Moravec F, Barton D, Shamsi S (2021b) Philometra longa n. sp. (Nematoda: Philometridae), a new parasite from the abdominal cavity of the eastern sea garfish Hyporhamphus australis (Hemiramphidae, Beloniformes) off Australia. Syst Parasitol 98:167–175 PubMed
Moravec F, Barton D, Shamsi S (2021c) Two species of philometrid nematodes (Philometridae) newly recorded from marine fishes off South Australia, including Philometra inconveniens n. sp. from Hyporhamphus melanochir (Valenciennes) (Hemiramphidae)
Negreiros L, Tavares-Dias M, Elisei C, Tavares L, Pereira F (2019) First description of the male of Philometroides acreanensis and phylogenetic assessment of Philometridae (Nematoda: Dracunculoidea) suggest instability of some taxa. Parasitol Int 69:30–38 PubMed
Nguyen L-T, Schmidt H, Von Haeseler A, Minh B (2015) IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol 32:268–274 PubMed
Quiazon K, Yoshinaga T (2013) Gonad-infecting philometrid Philometra philippinensis sp. nov. (Nematoda, Philometridae) from the bigeye barracuda Sphyraena forsteri Cuvier (Sphyraenidae) off Mariveles, Bataan Province, Philippine Archipelago. Acta Parasitol 58:504–514 PubMed
Quiazon K, Yoshinaga T, Doi H, Araki J, Ogawa K (2014) First description of male Philometra thaiensis Moravec, Fiala et Dyková, 2004 (Nematoda: Philometridae) from the body cavity of the eyespot pufferfish Tetraodon biocellatus Tirant, and evolutionary relationships of this species with other dracunculoids as inferred from SSU rRNA gene sequences. Helminthologia 51:236–245
Quiazon K, Yoshinaga T, Ogawa K (2008a) Taxonomical study into two new species of Philometra (Nematoda: Philometridae) previously identified as Philometra lateolabracis (Yamaguti, 1935). Folia Parasitol 55:29–41
Quiazon K, Yoshinaga T, Ogawa K (2008b) Philometra sawara sp. n. and a redescription of Philometra sciaenae Yamaguti, 1941 and Philometra nemipteri Luo, 2001 (Nematoda: Philometridae): a morphological and molecular approach. Folia Parasitol 55:277–290
Quiazon K, Yoshinaga T, Ogawa K (2010) Taxonomical note on the redescription of Philometroides seriolae (Ishii, 1931) infecting Japanese amberjack (Seriola quinqueradiata Temminck et Schlegel, 1845) in Japan. Journal of Tropical Biology 8:29–34
Ronquist F, Huelsenbeck J (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574 PubMed
Santos CP, Moravec F (2009) Tissue-dwelling philometrid nematodes of the fish Arapaima gigas in Brazil. J Helminthol 83:295–301 PubMed
Seo H-G, Seo J, Ryu M, Lee E, Jung S, Han H-J (2015) Molecular identification and development of a PCR assay for the detection of a philometrid nematode in rockfish Sebastes schlegeli. Korean Journal of Fisheries and Aquatic Sciences 48:731–738
Shamsi S, Briand MJ, Justine J-L (2017) Occurrence of Anisakis (Nematoda: Anisakidae) larvae in unusual hosts in Southern hemisphere. Parasitol Int 66:837–840 PubMed
Sokolov S, Kalmykov A, Malysheva S (2020) Phylogeny of dracunculoid nematodes (Chromadorea: Rhabditida: Spirurina: Dracunculoidea) from some Eurasian freshwater fishes. Zootaxa 4858:521–541
Taillebois L, Davenport D, Barton D, Crook D, Saunders T, Hearnden M, Saunders R, Newman S, Travers M, Dudgeon C, Maher S, Ovenden J (2021) A continuously distributed snapper (Lutjanus johnii, Bloch, 1792) has fine-scale population structure and is locally adapted to environment across its extensive range in northern Australia. ICES J Mar Sci 1–18. https://doi.org/10.1093/icesjms/fsab187
Wang S-X, Li L, Zhang L-P (2015) Redescription and genetic characterization of Philometra lagocephali Moravec et Justine 2008 (Nematoda: Philometridae) from Lagocephalus lunaris (Bloch and Schneider) (Tetraodontiformes: Tetradontidae) in the South China Sea. Acta Parasitol 60:395–406 PubMed
Wijová M, Moravec F, Horák A, Lukeš J (2006) Evolutionary relationships of Spirurina (Nematoda: Chromadorea: Rhabditida) with special emphasis on dracunculoid nematodes inferred from SSU rRNA gene sequences. Int J Parasitol 36:1067–1075 PubMed
Wu S-G, Wang G-T, Li W-X, Nie P (2005) A preliminary study on phylogeny of nine species of philometrids in China. Acta Hydrobiol Sin 29, 571–575. [Chinese with English abstract]