Draft Genome data including functional annotation of an emerging fungal pathogen Neodothiora populina causing a canker disease of trembling aspen in Interior Alaska
Status PubMed-not-MEDLINE Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články
Grantová podpora
P20 GM103395
NIGMS NIH HHS - United States
RL5 GM118990
NIGMS NIH HHS - United States
TL4 GM118992
NIGMS NIH HHS - United States
UL1 GM118991
NIGMS NIH HHS - United States
PubMed
41267897
PubMed Central
PMC12629266
DOI
10.1094/phytofr-09-24-0101-a
Knihovny.cz E-zdroje
- Klíčová slova
- Neodothiora populina, aspen running canker, draft genome, forest pathology, fungal pathogen, trembling aspen,
- Publikační typ
- časopisecké články MeSH
Neodothiora populina is a black yeast-like fungus in the family of Dothioraceae. It causes an aggressive canker disease of trembling aspen that results in widespread mortality of aspen across the boreal forest of Interior Alaska. Here we report a high-quality draft genome including functional annotation of this emerging fungal pathogen based on Nanopore Technology long-read sequences. Our initial genome assembly totaled 23,960,169 bp and contained 18 contigs and we identified 7,343 genes. This resource announcement provides new genomic data useful long-term to improve our understanding of forest health in Alaska.
Center of Genomics and Bioinformatics Indiana University Bloomington IN 47405
Department of Biology and Wildlife University of Alaska Fairbanks Fairbanks AK 99775
Department of Plant Pathology University of Nebraska Lincoln Lincoln NE 68583
Institute of Arctic Biology University of Alaska Fairbanks Fairbanks AK 99775
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