This randomized trial tested the effect of metformin on glycemic control and cardiac function in patients with heart failure (HF) and type 2 diabetes while evaluating intestinal effects on selected gut microbiome products reflected by trimethylamine-N-oxide (TMAO) and gut-derived incretins. Metformin treatment improved glycemic control and postprandial metabolism and enhanced postprandial glucagon-like peptide 1 (GLP-1) secretion but did not influence cardiac function or the TMAO levels. Metabolic effects of metformin in HF may be mediated by an improvement in intestinal endocrine function and enhanced secretion of the gut-derived incretin GLP-1.
- Publication type
- Journal Article MeSH
For the description of the crystallization in polymers, the exponential autocatalytic N th-order model, paired with the Hoffman-Lauritzen nucleation-growth theory (the conjunction denoted as the MCHL model), was introduced as an alternative to the classical Avrami concept. It was demonstrated, employing theoretical simulations, that the Avrami-based kinetics exhibits a strictly defined interval of asymmetries for the derivative kinetic data (conformable to the differential scanning calorimetry crystallization peaks), often incompatible with the experimental observations. On the other hand, the MCHL model is highly flexible, reproducing and largely extending the range of the Avrami asymmetries, thus effectively covering all possible single-process manifestations of the polymer crystallization mechanisms. The MCHL model was further proven to comply with the t 0.5-based evaluation of the Hoffman-Lauritzen nucleation constant, reducing the number of variables in the nonlinear optimization-based enumeration of the model's parameters. A unique relationship between the Avrami and MCHL kinetic was found.
- Publication type
- Journal Article MeSH
BACKGROUNDS: Oil palm ( Elaeis guineensis Jacq.), is the most significant and highest-yielding crop among oil-producing crops worldwide. In 2020/2022, Basal stem rot (BSR) disease was observed in six oil palm growing Districts in Ghana. METHODS: Field study and laboratory analysis were conducted. A random sampling technique was used to select five plantation blocks from each District. Single-point disease assessments were done using Standard Operating Procedure (SOP) with a severity scale of 0-4. Molecular assays were performed on each sample using nucleic acid as a template. ITS and GanET sequence analysis were performed along with the formation of a phylogenetic tree using the FASTA algorithm with the Fungus database from EBI and NCBI GenBank. Koch's postulate was followed to confirm the disease. RESULTS: The disease incidence was 11.3 % with the highest severity score of 4. BSR is characterised by stem decay large-perennial, woody brackets basidiocarps of average measurement of 2-65 cm in diameter on infected palms. Culture colonies were white, striated, undulating, woolly-cottony, and creamish pigment on the reverse depicting attributes of Ganoderma fungus. Molecular confirmation was done by combining ITS sequence of top matches of >97% to members of the genus Ganoderma, >98% and 99.3% identity to three sequences of Ganoderma sp. (HM138671; HM138670 and HM138672) generated from strains assigned to Ganoderma ryvardenii and compared with 132 published sequences of Ganoderma isolates. CONCLUSION: This is the first report of Ganoderma ryvardenii causing BSR disease on oil palm in Ghana and possibly the second report in Africa. However, the pathogen was first reported to cause similar diseases in oil palm in Cameroon.
- Keywords
- Basal Stem Rot, Ganoderma disease, Ghana, oil palm, phylogenetic,
- MeSH
- Arecaceae * microbiology MeSH
- Phylogeny MeSH
- Ganoderma * genetics pathogenicity isolation & purification MeSH
- Plant Diseases * microbiology MeSH
- Plant Stems * microbiology MeSH
- Publication type
- Journal Article MeSH
- Geographicals
- Ghana MeSH
Most migrating birds must replenish energy reserves during migration. Food availability significantly influences migratory routes and can even force migrants to detour, but still little is known about potential co-migration between insectivorous birds and their insect prey. To address this gap, we focused on day-flying insects and the insectivorous birds migrating through the Červenohorské sedlo mountain pass, Czech Republic. During four seasons of insect and bird trapping, using Malaise trap and mist-nets, respectively, we recorded 23 094 birds of 80 species and 35 087 migrating hoverflies (Syrphidae) of 47 species. We found a strong temporal correlation between the number of migrating hoverflies and insectivorous birds crossing the mountain pass. The observed pattern suggests that a similar phenomenon may occur in lowlands, where both groups stop over before and after crossing the mountains. These stopovers may provide migratory birds with abundant and reliable food resources. We also found that hoverflies comprised 88% of the biomass of all trapped insects, making them the most abundant potential prey of migrating birds. Our results outline the co-migration of birds and hoverflies and shed light on possible predator-prey dynamics during migration.
- Keywords
- Diptera, Syrphidae, co-migration, mountain barrier, predator, prey,
- Publication type
- Journal Article MeSH
With the rising threat to insect pollinators and the upcoming pollinator crisis, it is important to know how pollinators contribute to pollen transfer. The contributions of individual pollinator taxa to pollen transfer depend both on their abundance and on how much pollen each individual can carry, with overall importance being a multiplication of these two values. Here, we quantified pollen load across a diverse spectrum of insect pollinator taxa and variation in their abundance over 11 years. We found that, while variation in pollen load was relatively small among pollinator taxa (compared to relatively high variability among individuals within each insect taxon), the visitation levels changed significantly over the years, resulting in a high degree of variation in pollinator contributions to pollen transfer of each insect taxon at the community level. Thus, we conclude that the overall importance of pollinator taxa for pollen transfer is determined further by their abundances than by their taxon-specific capability for carrying various pollen loads. As the insect abundances vary over time and may change dramatically from year to year, our results highlight the importance of diverse and species-rich pollinator communities, as the population decline of one pollinator can be buffered by an increase in another pollinator taxa.
- Keywords
- conspecific pollen, pollen load, pollen transfer, pollination, pollinator abundance, pollinators,
- Publication type
- Journal Article MeSH
Gold-silver synergism has been well documented in many scientific works dealing with luminescent nanostructures that are exploitable in biomedical and environmental application. Frequently, the ratio of Au : Ag in synthetic mixtures was varied to influence the extent of Au-Ag synergism of the resulting luminescent gold-silver nanoclusters (GSNCs). However, in our approach, a new step, maturing under differing conditions using the same Au : Ag ratio (5 : 1), has been investigated systematically for the very first time. As referent systems, monometallic gold nanoclusters (AuNCs) and protein treated by the conditions of synthesis and maturing were prepared and investigated. The selected types of maturing conditions led to distinct changes in fluorescence characteristics and, consequently, Au-Ag synergism extent (evaluated as the ratio of fluorescence quantum yields of GSNCs versus AuNCs). The best synergism was obtained for GSNCs matured at 37°C for 2.5 h. The stability of luminescent signal of these GSNCs was tested in the presence of an excess (to 20 mM) of Cu(II) and/or Fe(III) ions (crucial cofactors in living systems). The same metallic ion concentration caused different extents of GSNC luminescence quenching, for which a plausible reasoning is suggested.
- Keywords
- bimetallic nanocluster, fluorescent nanocomposite, gold–silver nanocluster, luminescent nanocomposite, protein template, synergistic effect,
- Publication type
- Journal Article MeSH
Novel species of fungi described in this study include those from various countries as follows: Antarctica, Leuconeurospora bharatiensis from accumulated snow sediment sample. Argentina, Pseudocercospora quetri on leaf spots of Luma apiculata. Australia, Polychaetomyces verrucosus on submerged decaying wood in sea water, Ustilaginoidea cookiorum on Scleria levis, Xylaria guardiae as endophyte from healthy leaves of Macaranga tanarius. Belgium, Iodophanus taxi on leaf of Taxus baccata. Belize, Hygrocybe mirabilis on soil. Brazil, Gongronella irregularis from soil, Linodochium splendidum on decaying sheath of Euterpe oleracea, Nothophysalospora agapanthi (incl. Nothophysalospora gen. nov.) on flower stalks of Agapanthus praecox, Phaeosphaeria tabebuiae on leaf of Tabebuia sp., Verrucohypha endophytica (incl. Verrucohypha gen. nov.) from healthy roots of Acrocomia aculeata. Estonia, Inosperma apricum on soil under Quercus robur. Greece, Monosporascus solitarius isolated from surface-sterilised, asymptomatic roots of Microthlaspi perfoliatum. India, Diaporthe neocapsici on young seedling stems of Capsicum annuum, Fuscoporia naditirana on dead wood, Sebacina spongicarpa on soil, Torula kanvae from the gut of a Copris signatus beetle. Iran, Sarcinomyces pruni from twig and petiole tissues of Prunus persica and Prunus armeniaca, Xenodidymella quercicola from leaf spots of Quercus brantii. Italy, Agaricus aereiceps on grass, Agaricus bellui in meadows, Agaricus fabrianensis in urban grasslands, Beaucarneamyces muscorum on moss growing in forest, Xenoanthostomella quercus on leaf litter of Quercus ilex. Netherlands, Alfaria neerlandica on stem lesions of Cortaderia selloana, Neodictyosporium juncicola on culms of Juncus maritimus, Penicillium geertdesnooi from soil under Papaver rhoeas, Russula abscondita on rich calcareous soil with Quercus, Russula multiseptata on rich clay soil with Quercus, Russula purpureopallescens on soil with Populus, Sarocladium caricicola on leaves of Carex riparia. Pakistan, Circinaria shimlaensis on limestone rocks. Panama, Acrocalymma philodendri on leaf spots of Philodendron sp., Caligospora panamaensis on leaf litter, Chlamydocillium simulans associated with a Xylaria sp., Corynesporina panamaensis on leaf litter, Cylindromonium panamaense on twig litter of angiosperm, Cyphellophora panamaensis on twig litter of angiosperm, Microcera panamensis on leaf litter of fern, Pseudotricholoma pusillum in tropical montane forest dominated by Quercus spp., Striaticonidium panamaense on leaf litter, Yunnanomyces panamaensis on leaf litter. Poland, Albocremella abscondita (incl. Albocremella gen. nov.) from rhizoids of liverwort Conocephalum salebrosum. Portugal, Agaricus occidualis in meadows. South Africa, Alternaria elsarustiae on culms of unidentified Poaceae, Capronia capensis on dead twig of unidentified angiosperm, Codinaeella bulbinicola on dead leaves of Bulbine frutescens, Cytospora carpobroticola on leaf of Carpobrotus quadrifidus, Neophaeomoniella watsoniae on leaf of Watsonia sp., Neoplatysporoides aloigena on leaf of Aloe khamiesensis, Nothodactylaria comitabilis on living leaf of Itea rhamnoides, Nothopenidiella beaucarneae (incl. Nothopenidiella gen. nov.) on dead leaves of Beaucarnea stricta, Orbilia kirstenboschensis on dead flower stalks of Agapanthus praecox, Phragmocephala agapanthi on dead flower stalks of Agapanthus praecox, Podocarpigena hagahagaensis (incl. Podocarpigena gen. nov.) on leaf spots of Podocarpus falcatus, Sporisorium enterogonipteri from the gut of Gonipterus sp., Synnemapestaloides searsiae on leaf of Searsia populifolia, Xenophragmocapnias diospyri (incl. Xenophragmocapnias gen. nov.) on leaf spots of Diospyros sp., Yunnanomyces hagahagaensis on leaf spots of Sideroxylon inerme. Spain, Agaricus basicinctus in meadows, Agaricus quercetorum among leaf litter in oak forests, Coprinopsis palaciosii on degraded woody debris, Inocybe complutensis in calcareous loamy soil, Inocybe tanitiae in calcareous sandy soil, Mycena subfragosa on dead leaves of Salix atrocinerea, Pseudobaeospora cortegadensis in laurel forests, Trichoderma sedimenticola from fluvial sediments. Sweden, Inocybe badjelanndana on calcareous soil. Ukraine, Beaucarneamyces lupini on overwintered stems of Lupinus polyphyllus, Protocreopsis globulosa on thallus and apothecia of Lecania cyrtella on bark of Populus sp., Thyridium tiliae on dead twigs of Tilia sp. USA, Cladosporium louisianense, Cyphellophora americana from a bedroom vent, Extremus massachusettsianus from lyse buffer, Myxotrichum tapetae on carpet in basement, Neospissiomyces floridanus (incl. Neospissiomyces gen. nov.) on swab from hospital, Polychaetomyces marinus (incl. Polychaetomyces gen. nov.) on submerged driftwood in sea water, Steccherinum fragrans on hardwood fallen on the beach, Steinbeckomyces carnegieae (incl. Steinbeckomyces gen. nov.) on Carnegiea gigantea, Tolypocladium pennsylvanicum from air sampled in basement. Vietnam, Acidomyces ducanhii from Aglaia flowers, Acidomyces paludis from dead bark of Acacia sp., Phakopsora sageretiae on Sageretia theezans, Puccinia stixis on Stixis scandens. Morphological and culture characteristics are supported by DNA barcodes. Citation: Crous PW, Wingfield MJ, Jurjević Ž, et al. (2024). Fungal Planet description sheets: 1697-1780. Fungal Systematics and Evolution 14: 325-577. doi: 10.3114/fuse.2024.14.19.
- Keywords
- ITS nrDNA barcodes, LSU, new taxa, systematics,
- Publication type
- Journal Article MeSH
Symbiotic relationships between eukaryotes and prokaryotes played pivotal roles in the evolution of life and drove the emergence of specialized symbiotic structures in animals, plants and fungi. The host-evolved symbiotic structures of microbial eukaryotes - the vast majority of such hosts in nature - remain largely unstudied. Here we describe highly structured symbiosomes within three free-living anaerobic protists (Anaeramoeba spp.). We dissect this symbiosis using complete genome sequencing and transcriptomics of host and symbiont cells coupled with fluorescence in situ hybridization, and 3D reconstruction using focused-ion-beam scanning electron microscopy. The emergence of the symbiosome is underpinned by expansion of gene families encoding regulators of membrane trafficking and phagosomal maturation and extensive bacteria-to-eukaryote lateral transfer. The symbionts reside deep within a symbiosomal membrane network that enables metabolic syntrophy by precisely positioning sulfate-reducing bacteria alongside host hydrogenosomes. Importantly, the symbionts maintain connections to the Anaeramoeba plasma membrane, blurring traditional boundaries between ecto- and endosymbiosis.
A newly identified subtype of hereditary axonal motor neuropathy, characterized by early proximal limb involvement, has been discovered in a cohort of 34 individuals with biallelic variants in von Willebrand factor A domain-containing 1 (VWA1). This study further delineates the disease characteristics in a cohort of 20 individuals diagnosed through genome or exome sequencing, incorporating neurophysiological, laboratory and imaging data, along with data from previously reported cases across three different studies. Newly reported clinical features include hypermobility/hyperlaxity, axial weakness, dysmorphic signs, asymmetric presentation, dystonic features and, notably, upper motor neuron signs. Foot drop, foot deformities and distal leg weakness followed by early proximal leg weakness are confirmed to be initial manifestations. Additionally, this study identified 11 novel VWA1 variants, reaffirming the 10 bp insertion-induced p.Gly25ArgfsTer74 as the most prevalent disease-causing allele, with a carrier frequency of ∼1 in 441 in the UK and Western European population. Importantly, VWA1-related pathology may mimic various neuromuscular conditions, advocating for its inclusion in diverse gene panels spanning hereditary neuropathies to muscular dystrophies. The study highlights the potential of lower quality control filters in exome analysis to enhance diagnostic yield of VWA1 disease that may account for up to 1% of unexplained hereditary neuropathies.
- Keywords
- VWA1, neuromuscular disorders, neuromyopathy, recessive disorders,
- Publication type
- Journal Article MeSH
Baobab (Adansonia digitata) is a long-lived tree endemic to Africa with economic, ecological, and cultural importance, yet its genomic features are underexplored. Here, we report a chromosome-level reference genome anchored to 42 chromosomes for A. digitata, alongside draft assemblies for a sibling tree, two trees from distinct locations in Africa, and A. za from Madagascar. The baobab genome is uniquely rich in DNA transposons, which make up 33%, while LTR retrotransposons account for 10%. A. digitata experienced whole genome multiplication (WGM) around 30 million years ago (MYA), followed by a second WGM event 3-11 MYA, likely linked to autotetraploidy. Resequencing of 25 trees identify three subpopulations, with gene flow across West Africa distinct from East Africa. Gene enrichment and fixation index (Fst) analyses show baobab retained multiple circadian, flowering, and light-responsive genes, which likely support longevity through the UV RESISTANCE LOCUS 8 (UVR8) pathway. In sum, we provide genomic resources and insights for baobab breeding and conservation.
- MeSH
- Chromosomes, Plant * genetics MeSH
- Phylogeny MeSH
- Adaptation, Physiological genetics MeSH
- Genome, Plant * MeSH
- Evolution, Molecular * MeSH
- Retroelements genetics MeSH
- Trees genetics MeSH
- Gene Flow MeSH
- DNA Transposable Elements genetics MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Geographicals
- Madagascar MeSH
- Names of Substances
- Retroelements MeSH
- DNA Transposable Elements MeSH
