Nejvíce citovaný článek - PubMed ID 26017500
tcR: an R package for T cell receptor repertoire advanced data analysis
The diversity of T-cell receptors recognizing foreign pathogens is generated through a highly stochastic recombination process, making the independent production of the same sequence rare. Yet unrelated individuals do share receptors, which together constitute a "public" repertoire of abundant clonotypes. The TCR repertoire is initially formed prenatally, when the enzyme inserting random nucleotides is downregulated, producing a limited diversity subset. By statistically analyzing deep sequencing T-cell repertoire data from twins, unrelated individuals of various ages, and cord blood, we show that T-cell clones generated before birth persist and maintain high abundances in adult organisms for decades, slowly decaying with age. Our results suggest that large, low-diversity public clones are created during pre-natal life, and survive over long periods, providing the basis of the public repertoire.
- MeSH
- antigenní specifita receptorů T-buněk genetika MeSH
- dvojčata monozygotní genetika MeSH
- genetická variace genetika MeSH
- genová přestavba T-lymfocytů genetika MeSH
- kultivované buňky MeSH
- lidé MeSH
- molekulární sekvence - údaje MeSH
- receptory antigenů T-buněk fyziologie MeSH
- rekombinace genetická MeSH
- sekvence nukleotidů MeSH
- stárnutí genetika imunologie MeSH
- vývojová regulace genové exprese genetika imunologie MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- receptory antigenů T-buněk MeSH