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A nonlinear electrophoretic model for PeakMaster: I. mathematical model
V. Hruška, M. Riesová, B. Gaš
Jazyk angličtina Země Německo
Typ dokumentu časopisecké články, práce podpořená grantem
NLK
Medline Complete (EBSCOhost)
od 2012-10-01 do Před 1 rokem
Wiley Online Library (archiv)
od 1999-01-01 do 2012-12-31
PubMed
22528412
DOI
10.1002/elps.201100554
Knihovny.cz E-zdroje
- MeSH
- algoritmy MeSH
- elektroforéza MeSH
- nelineární dynamika MeSH
- počítačová simulace MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
We extended the linearized model of electromigration, which is used by PeakMaster, by calculation of nonlinear dispersion and diffusion of zones. The model results in the continuity equation for the shape function ϕ(x,t) of the zone: ϕ(t) = -(v(0) + v(EMD) ϕ)ϕ(x) + δϕ(xx) that contains linear (v(0)) and nonlinear migration (v(EMD)), diffusion (δ), and subscripts x and t stand for partial derivatives. It is valid for both analyte and system zones, and we present equations how to calculate characteristic zone parameters. We solved the continuity equation by Hopf-Cole transformation and applied it for two different initial conditions-the Dirac function resulting in the Haarhoff-van der Linde (HVL) function and the rectangular pulse function, which resulted in a function that we denote as the HVLR function. The nonlinear model was implemented in PeakMaster 5.3, which uses the HVLR function to predict the electropherogram for a given background electrolyte and a composition of the sample. HVLR function also enables to draw electropherograms with significantly wide injection zones, which was not possible before. The nonlinear model was tested by a comparison with a simulation by Simul 5, which solves the complete nonlinear model of electromigration numerically.
Citace poskytuje Crossref.org
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- $a We extended the linearized model of electromigration, which is used by PeakMaster, by calculation of nonlinear dispersion and diffusion of zones. The model results in the continuity equation for the shape function ϕ(x,t) of the zone: ϕ(t) = -(v(0) + v(EMD) ϕ)ϕ(x) + δϕ(xx) that contains linear (v(0)) and nonlinear migration (v(EMD)), diffusion (δ), and subscripts x and t stand for partial derivatives. It is valid for both analyte and system zones, and we present equations how to calculate characteristic zone parameters. We solved the continuity equation by Hopf-Cole transformation and applied it for two different initial conditions-the Dirac function resulting in the Haarhoff-van der Linde (HVL) function and the rectangular pulse function, which resulted in a function that we denote as the HVLR function. The nonlinear model was implemented in PeakMaster 5.3, which uses the HVLR function to predict the electropherogram for a given background electrolyte and a composition of the sample. HVLR function also enables to draw electropherograms with significantly wide injection zones, which was not possible before. The nonlinear model was tested by a comparison with a simulation by Simul 5, which solves the complete nonlinear model of electromigration numerically.
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