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15gag proteinase of myeloblastosis-associated virus: specificity studies with substrate-based inhibitors
L Pavlickova, D Stys, M Soucek, J Urban, O Hruskova, J Sedlacek, P Strop
Jazyk angličtina Země Spojené státy americké
Typ dokumentu srovnávací studie
Grantová podpora
PL19
MZ0
CEP - Centrální evidence projektů
- MeSH
- aspartátové endopeptidasy * antagonisté a inhibitory MeSH
- HIV-1 enzymologie MeSH
- HIV-proteasa metabolismus MeSH
- inhibitory proteas farmakologie chemická syntéza MeSH
- kinetika MeSH
- molekulární sekvence - údaje MeSH
- oligopeptidy farmakologie chemická syntéza MeSH
- sekvence aminokyselin MeSH
- substrátová specifita MeSH
- virus ptačí myeloblastózy * enzymologie MeSH
- vztahy mezi strukturou a aktivitou MeSH
- Publikační typ
- srovnávací studie MeSH
The specificity of the proteinase of myeloblastosis-associated virus (MAV) was studied with (a) 21 substrate-based inhibitors, (b) 9 inhibitors with pseudopalindrome sequences, (c) 8 chimeric inhibitors, and (d) 3 compounds designed as human immunodeficiency virus 1 (HIV-1) proteinase inhibitors. The central inhibitory unit (transition state or cleaved bond analog) and the role of the inhibitor side chains from P4 to P4' were investigated. MAV proteinase prefers an aromatic side chain in P1 and a small aliphatic nonpolar chain in P2 and P2'. Residues in P5 and P4 positions are outside of the short catalytic cleft of the enzyme, but still influence binding considerably. The data obtained provide evidence that the MAV proteinase has generally lower specificity and poorer binding than the HIV proteinase.
Institute of Molecular Genetics Czechoslovak Academy of Science Prague Czechoslovakia
Institute of Organic Chemistry and Biochemistry Czechoslovak Academy of Science Prague
Citace poskytuje Crossref.org
Literatura
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