-
Something wrong with this record ?
Characterization of the part of N-terminal PIP2 binding site of the TRPM1 channel
M. Jirku, L. Bumba, L. Bednarova, M. Kubala, M. Sulc, M. Franek, L. Vyklicky, J. Vondrasek, J. Teisinger, K. Bousova,
Language English Country Netherlands
Document type Journal Article, Research Support, Non-U.S. Gov't
- MeSH
- Circular Dichroism MeSH
- Phosphatidylinositol 4,5-Diphosphate chemistry metabolism MeSH
- TRPM Cation Channels chemistry genetics metabolism MeSH
- Humans MeSH
- Surface Plasmon Resonance MeSH
- Recombinant Proteins biosynthesis chemistry isolation & purification MeSH
- Protein Structure, Secondary MeSH
- Molecular Dynamics Simulation MeSH
- Protein Structure, Tertiary MeSH
- Protein Binding MeSH
- Binding Sites MeSH
- Check Tag
- Humans MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
Transient receptor potential melastatin-1 (TRPM1) is a calcium channel that is essential for the depolarization of photo-responsive retinal bipolar cells, but most of the physiological functions and cellular roles of this channel are still poorly understood. Most transient receptor potential (TRP) channels are typically regulated by intracellular proteins and other signaling molecules. Phosphatidylinositol-4,5 bisphosphate (PIP2), a minor phospholipid component of cell membranes, has previously been shown to directly bind TRP channels and to play a unique role in modulating receptor function. To characterize the binding of PIP2 as a potential regulator of TRPM1, we utilized biophysical methods and molecular modeling to study the interactions of PIP2 with an N-terminal fragment of TRPM1 (residues A451-N566). The basic N-terminal residue K464 of TRPM1 suggests that it is part of putative pleckstrin homology (PH) domain and is involved in the interactions with PIP2. This is the first report detailing the binding of PIP2 at the N-terminus of the TRPM1 receptor.
2nd Faculty of Medicine Charles University Prague 15006 Prague Czech Republic
3rd Faculty of Medicine Charles University Prague 10000 Prague Czech Republic
Faculty of Science Charles University Prague 12843 Prague Czech Republic
Faculty of Science Palacky University 78341 Olomouc Czech Republic
Institute of Microbiology Academy of Sciences of the Czech Republic 14220 Prague Czech Republic
Institute of Physiology Academy of Sciences of the Czech Republic 14220 Prague Czech Republic
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc16027991
- 003
- CZ-PrNML
- 005
- 20161021095900.0
- 007
- ta
- 008
- 161005s2015 ne f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1016/j.bpc.2015.10.005 $2 doi
- 024 7_
- $a 10.1016/j.bpc.2015.10.005 $2 doi
- 035 __
- $a (PubMed)26544986
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a ne
- 100 1_
- $a Jirku, Michaela $u Faculty of Science, Charles University in Prague, 12843 Prague, Czech Republic; Institute of Physiology, Academy of Sciences of the Czech Republic, 14220 Prague, Czech Republic.
- 245 10
- $a Characterization of the part of N-terminal PIP2 binding site of the TRPM1 channel / $c M. Jirku, L. Bumba, L. Bednarova, M. Kubala, M. Sulc, M. Franek, L. Vyklicky, J. Vondrasek, J. Teisinger, K. Bousova,
- 520 9_
- $a Transient receptor potential melastatin-1 (TRPM1) is a calcium channel that is essential for the depolarization of photo-responsive retinal bipolar cells, but most of the physiological functions and cellular roles of this channel are still poorly understood. Most transient receptor potential (TRP) channels are typically regulated by intracellular proteins and other signaling molecules. Phosphatidylinositol-4,5 bisphosphate (PIP2), a minor phospholipid component of cell membranes, has previously been shown to directly bind TRP channels and to play a unique role in modulating receptor function. To characterize the binding of PIP2 as a potential regulator of TRPM1, we utilized biophysical methods and molecular modeling to study the interactions of PIP2 with an N-terminal fragment of TRPM1 (residues A451-N566). The basic N-terminal residue K464 of TRPM1 suggests that it is part of putative pleckstrin homology (PH) domain and is involved in the interactions with PIP2. This is the first report detailing the binding of PIP2 at the N-terminus of the TRPM1 receptor.
- 650 _2
- $a vazebná místa $7 D001665
- 650 _2
- $a cirkulární dichroismus $7 D002942
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a simulace molekulární dynamiky $7 D056004
- 650 _2
- $a fosfatidylinositol-4,5-difosfát $x chemie $x metabolismus $7 D019269
- 650 _2
- $a vazba proteinů $7 D011485
- 650 _2
- $a sekundární struktura proteinů $7 D017433
- 650 _2
- $a terciární struktura proteinů $7 D017434
- 650 _2
- $a rekombinantní proteiny $x biosyntéza $x chemie $x izolace a purifikace $7 D011994
- 650 _2
- $a povrchová plasmonová rezonance $7 D020349
- 650 _2
- $a kationtové kanály TRPM $x chemie $x genetika $x metabolismus $7 D050053
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Bumba, Ladislav $u Institute of Microbiology, Academy of Sciences of the Czech Republic, 14220 Prague, Czech Republic.
- 700 1_
- $a Bednarova, Lucie $u Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 16610 Prague, Czech Republic.
- 700 1_
- $a Kubala, Martin $u Faculty of Science, Palacky University, 78341 Olomouc, Czech Republic.
- 700 1_
- $a Sulc, Miroslav $u Faculty of Science, Charles University in Prague, 12843 Prague, Czech Republic; Institute of Microbiology, Academy of Sciences of the Czech Republic, 14220 Prague, Czech Republic.
- 700 1_
- $a Franek, Miloslav $u 3rd Faculty of Medicine, Charles University in Prague, 10000 Prague, Czech Republic.
- 700 1_
- $a Vyklicky, Ladislav $u Institute of Physiology, Academy of Sciences of the Czech Republic, 14220 Prague, Czech Republic.
- 700 1_
- $a Vondrasek, Jiri $u Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 16610 Prague, Czech Republic.
- 700 1_
- $a Teisinger, Jan $u Institute of Physiology, Academy of Sciences of the Czech Republic, 14220 Prague, Czech Republic.
- 700 1_
- $a Bousova, Kristyna $u Institute of Physiology, Academy of Sciences of the Czech Republic, 14220 Prague, Czech Republic; 2nd Faculty of Medicine, Charles University in Prague, 15006 Prague, Czech Republic. Electronic address: kristyna.bousova@fgu.cas.cz.
- 773 0_
- $w MED00000773 $t Biophysical chemistry $x 1873-4200 $g Roč. 207, č. - (2015), s. 135-42
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/26544986 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20161005 $b ABA008
- 991 __
- $a 20161021100308 $b ABA008
- 999 __
- $a ok $b bmc $g 1166305 $s 952621
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2015 $b 207 $c - $d 135-42 $e 20151027 $i 1873-4200 $m Biophysical chemistry $n Biophys Chem $x MED00000773
- LZP __
- $a Pubmed-20161005