-
Something wrong with this record ?
Transcriptional regulation of male-sterility in 7B-1 male-sterile tomato mutant
V. Omidvar, I. Mohorianu, T. Dalmay, Y. Zheng, Z. Fei, A. Pucci, A. Mazzucato, V. Večeřová, M. Sedlářova, M. Fellner,
Language English Country United States
Document type Journal Article
NLK
Directory of Open Access Journals
from 2006
Free Medical Journals
from 2006
Public Library of Science (PLoS)
from 2006
PubMed Central
from 2006
Europe PubMed Central
from 2006
ProQuest Central
from 2006-12-01
Open Access Digital Library
from 2006-01-01
Open Access Digital Library
from 2006-10-01
Open Access Digital Library
from 2006-01-01
Medline Complete (EBSCOhost)
from 2008-01-01
Nursing & Allied Health Database (ProQuest)
from 2006-12-01
Health & Medicine (ProQuest)
from 2006-12-01
Public Health Database (ProQuest)
from 2006-12-01
ROAD: Directory of Open Access Scholarly Resources
from 2006
- MeSH
- Transcription, Genetic * MeSH
- Gene Ontology MeSH
- Glucans metabolism MeSH
- Mutation * MeSH
- Plant Infertility genetics MeSH
- Gene Expression Regulation, Plant * MeSH
- Solanum lycopersicum genetics metabolism MeSH
- Gene Expression Profiling MeSH
- Computational Biology methods MeSH
- Publication type
- Journal Article MeSH
The 7B-1 tomato (Solanum lycopersicum L. cv Rutgers) is a male-sterile mutant with enhanced tolerance to abiotic stress, which makes it a potential candidate for hybrid seed breeding and stress engineering. To underline the molecular mechanism regulating the male-sterility in 7B-1, transcriptomic profiles of the 7B-1 male-sterile and wild type (WT) anthers were studied using mRNA sequencing (RNA-Seq). In total, 768 differentially expressed genes (DEGs) were identified, including 132 up-regulated and 636 down-regulated transcripts. Gene ontology (GO) enrichment analysis of DEGs suggested a general impact of the 7B-1 mutation on metabolic processes, such as proteolysis and carbohydrate catabolic process. Sixteen candidates with key roles in regulation of anther development were subjected to further analysis using qRT-PCR and in situ hybridization. Cytological studies showed several defects associated with anther development in the 7B-1 mutant, including unsynchronized anther maturation, dysfunctional meiosis, arrested microspores, defect in callose degradation and abnormal tapetum development. TUNEL assay showed a defect in programmed cell death (PCD) of tapetal cells in 7B-1 anthers. The present study provides insights into the transcriptome of the 7B-1 mutant. We identified several genes with altered expression level in 7B-1 (including beta-1,3 glucanase, GA2oxs, cystatin, cysteine protease, pectinesterase, TA29, and actin) that could potentially regulate anther developmental processes, such as meiosis, tapetum development, and cell-wall formation/degradation.
Boyce Thompson Institute Cornell University Ithaca NY United States of America
Department of Agricultural and Forestry Sciences University of Tuscia Viterbo Italy
School of Biological Sciences University of East Anglia Norwich United Kingdom
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc17031060
- 003
- CZ-PrNML
- 005
- 20171025122834.0
- 007
- ta
- 008
- 171025s2017 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1371/journal.pone.0170715 $2 doi
- 035 __
- $a (PubMed)28178307
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Omidvar, Vahid $u Laboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University and Institute of Experimental Botany AS CR, Šlechtitelů 27, Olomouc-Holice, Czech Republic.
- 245 10
- $a Transcriptional regulation of male-sterility in 7B-1 male-sterile tomato mutant / $c V. Omidvar, I. Mohorianu, T. Dalmay, Y. Zheng, Z. Fei, A. Pucci, A. Mazzucato, V. Večeřová, M. Sedlářova, M. Fellner,
- 520 9_
- $a The 7B-1 tomato (Solanum lycopersicum L. cv Rutgers) is a male-sterile mutant with enhanced tolerance to abiotic stress, which makes it a potential candidate for hybrid seed breeding and stress engineering. To underline the molecular mechanism regulating the male-sterility in 7B-1, transcriptomic profiles of the 7B-1 male-sterile and wild type (WT) anthers were studied using mRNA sequencing (RNA-Seq). In total, 768 differentially expressed genes (DEGs) were identified, including 132 up-regulated and 636 down-regulated transcripts. Gene ontology (GO) enrichment analysis of DEGs suggested a general impact of the 7B-1 mutation on metabolic processes, such as proteolysis and carbohydrate catabolic process. Sixteen candidates with key roles in regulation of anther development were subjected to further analysis using qRT-PCR and in situ hybridization. Cytological studies showed several defects associated with anther development in the 7B-1 mutant, including unsynchronized anther maturation, dysfunctional meiosis, arrested microspores, defect in callose degradation and abnormal tapetum development. TUNEL assay showed a defect in programmed cell death (PCD) of tapetal cells in 7B-1 anthers. The present study provides insights into the transcriptome of the 7B-1 mutant. We identified several genes with altered expression level in 7B-1 (including beta-1,3 glucanase, GA2oxs, cystatin, cysteine protease, pectinesterase, TA29, and actin) that could potentially regulate anther developmental processes, such as meiosis, tapetum development, and cell-wall formation/degradation.
- 650 _2
- $a výpočetní biologie $x metody $7 D019295
- 650 _2
- $a stanovení celkové genové exprese $7 D020869
- 650 12
- $a regulace genové exprese u rostlin $7 D018506
- 650 _2
- $a genová ontologie $7 D063990
- 650 _2
- $a glukany $x metabolismus $7 D005936
- 650 _2
- $a Solanum lycopersicum $x genetika $x metabolismus $7 D018551
- 650 12
- $a mutace $7 D009154
- 650 _2
- $a neplodnost rostlin $x genetika $7 D051479
- 650 12
- $a genetická transkripce $7 D014158
- 655 _2
- $a časopisecké články $7 D016428
- 700 1_
- $a Mohorianu, Irina $u School of Computing Sciences, University of East Anglia, Norwich, United Kingdom. School of Biological Sciences, University of East Anglia, Norwich, United Kingdom.
- 700 1_
- $a Dalmay, Tamas $u School of Biological Sciences, University of East Anglia, Norwich, United Kingdom.
- 700 1_
- $a Zheng, Yi $u Boyce Thompson Institute, Cornell University, Ithaca, NY, United States of America.
- 700 1_
- $a Fei, Zhangjun $u Boyce Thompson Institute, Cornell University, Ithaca, NY, United States of America.
- 700 1_
- $a Pucci, Anna $u Department of Agricultural and Forestry Sciences, University of Tuscia, Viterbo, Italy.
- 700 1_
- $a Mazzucato, Andrea $u Department of Agricultural and Forestry Sciences, University of Tuscia, Viterbo, Italy.
- 700 1_
- $a Večeřová, Vendula $u Department of Botany, Faculty of Science, Palacký University in Olomouc, Šlechtitelů 27, Olomouc-Holice, Czech Republic.
- 700 1_
- $a Sedlářova, Michaela $u Department of Botany, Faculty of Science, Palacký University in Olomouc, Šlechtitelů 27, Olomouc-Holice, Czech Republic.
- 700 1_
- $a Fellner, Martin $u Laboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University and Institute of Experimental Botany AS CR, Šlechtitelů 27, Olomouc-Holice, Czech Republic.
- 773 0_
- $w MED00180950 $t PloS one $x 1932-6203 $g Roč. 12, č. 2 (2017), s. e0170715
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/28178307 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20171025 $b ABA008
- 991 __
- $a 20171025122916 $b ABA008
- 999 __
- $a ok $b bmc $g 1254653 $s 992087
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2017 $b 12 $c 2 $d e0170715 $e 20170208 $i 1932-6203 $m PLoS One $n PLoS One $x MED00180950
- LZP __
- $a Pubmed-20171025