Detail
Článek
Článek online
FT
Medvik - BMČ
  • Je něco špatně v tomto záznamu ?

Holography microscopy as an artifact-free alternative to phase-contrast

L. Pastorek, T. Venit, P. Hozák,

. 2018 ; 149 (2) : 179-186. [pub] 20171128

Jazyk angličtina Země Německo

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/bmc18024463

Artifact-free microscopic images represent a key requirement of multi-parametric image analysis in modern biomedical research. Holography microscopy (HM) is one of the quantitative phase imaging techniques, which has been finding new applications in life science, especially in morphological screening, cell migration, and cancer research. Rather than the classical imaging of absorbing (typically stained) specimens by bright-field microscopy, the information about the light-wave's phase shifts induced by the biological sample is employed for final image reconstruction. In this comparative study, we investigated the usability and the reported advantage of the holography imaging. The claimed halo-free imaging was analyzed compared to the widely used Zernike phase-contrast microscopy. The intensity and phase cross-membrane profiles at the periphery of the cell were quantified. The intensity profile for cells in the phase-contrast images suffers from the significant increase in intensity values around the cell border. On the contrary, no distorted profile is present outside the cell membrane in holography images. The gradual increase in phase shift values is present in the internal part of the cell body projection in holography image. This increase may be related to the increase in the cell internal material according to the dry mass theory. Our experimental data proved the halo-free nature of the holography imaging, which is an important prerequisite of the correct thresholding and cell segmentation, nowadays frequently required in high-content screening and other image-based analysis. Consequently, HM is a method of choice whenever the image analysis relies on the accurate data on cell boundaries.

Citace poskytuje Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc18024463
003      
CZ-PrNML
005      
20180716112746.0
007      
ta
008      
180709s2018 gw f 000 0|eng||
009      
AR
024    7_
$a 10.1007/s00418-017-1610-4 $2 doi
035    __
$a (PubMed)29185051
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a gw
100    1_
$a Pastorek, Lukáš $u Department of Biology of the Cell Nucleus, Institute of Molecular Genetics, Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague 4, Czech Republic. Microscopy Centre, Institute of Molecular Genetics, Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague 4, Czech Republic.
245    10
$a Holography microscopy as an artifact-free alternative to phase-contrast / $c L. Pastorek, T. Venit, P. Hozák,
520    9_
$a Artifact-free microscopic images represent a key requirement of multi-parametric image analysis in modern biomedical research. Holography microscopy (HM) is one of the quantitative phase imaging techniques, which has been finding new applications in life science, especially in morphological screening, cell migration, and cancer research. Rather than the classical imaging of absorbing (typically stained) specimens by bright-field microscopy, the information about the light-wave's phase shifts induced by the biological sample is employed for final image reconstruction. In this comparative study, we investigated the usability and the reported advantage of the holography imaging. The claimed halo-free imaging was analyzed compared to the widely used Zernike phase-contrast microscopy. The intensity and phase cross-membrane profiles at the periphery of the cell were quantified. The intensity profile for cells in the phase-contrast images suffers from the significant increase in intensity values around the cell border. On the contrary, no distorted profile is present outside the cell membrane in holography images. The gradual increase in phase shift values is present in the internal part of the cell body projection in holography image. This increase may be related to the increase in the cell internal material according to the dry mass theory. Our experimental data proved the halo-free nature of the holography imaging, which is an important prerequisite of the correct thresholding and cell segmentation, nowadays frequently required in high-content screening and other image-based analysis. Consequently, HM is a method of choice whenever the image analysis relies on the accurate data on cell boundaries.
650    _2
$a artefakty $7 D016477
650    _2
$a HeLa buňky $7 D006367
650    12
$a holografie $7 D006696
650    _2
$a lidé $7 D006801
650    12
$a mikroskopie fázově kontrastní $7 D008858
650    _2
$a Saccharomyces cerevisiae $x cytologie $x růst a vývoj $7 D012441
650    _2
$a nádorové buňky kultivované $7 D014407
655    _2
$a časopisecké články $7 D016428
700    1_
$a Venit, Tomáš $u Division BIOCEV, Laboratory of Epigenetics of the Cell Nucleus, Institute of Molecular Genetics, Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic.
700    1_
$a Hozák, Pavel $u Department of Biology of the Cell Nucleus, Institute of Molecular Genetics, Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague 4, Czech Republic. hozak@img.cas.cz. Microscopy Centre, Institute of Molecular Genetics, Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague 4, Czech Republic. hozak@img.cas.cz. Division BIOCEV, Laboratory of Epigenetics of the Cell Nucleus, Institute of Molecular Genetics, Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic. hozak@img.cas.cz.
773    0_
$w MED00002042 $t Histochemistry and cell biology $x 1432-119X $g Roč. 149, č. 2 (2018), s. 179-186
856    41
$u https://pubmed.ncbi.nlm.nih.gov/29185051 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20180709 $b ABA008
991    __
$a 20180716113044 $b ABA008
999    __
$a ok $b bmc $g 1316594 $s 1021384
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2018 $b 149 $c 2 $d 179-186 $e 20171128 $i 1432-119X $m Histochemistry and cell biology $n Histochem Cell Biol $x MED00002042
LZP    __
$a Pubmed-20180709

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...