Detail
Článek
Článek online
FT
Medvik - BMČ
  • Je něco špatně v tomto záznamu ?

Organization and evolution of two repetitive sequences, 18-24J and 12-13P, in the genome of Chenopodium (Amaranthaceae)

M. Orzechowska, M. Majka, H. Weiss-Schneeweiss, A. Kovařík, N. Borowska-Zuchowska, B. Kolano,

. 2018 ; 61 (9) : 643-652. [pub] 20180801

Jazyk angličtina Země Kanada

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/bmc19000501

The abundance and chromosomal organization of two repetitive sequences named 12-13P and 18-24J were analyzed in 24 diploid and nine polyploid species of Chenopodium s.l., with special attention to Chenopodium s.s. Both sequences were predominantly present in species of Chenopodium s.s.; however, differences in the amplification levels were observed among the species. The 12-13P repeat was highly amplified in all of the analyzed Eurasian species, whereas the American diploids showed a marked variation in the amplification levels. The 12-13P repeat contains a tandemly arranged 40 bp minisatellite element forming a large proportion of the genome of Chenopodium (up to 3.5%). FISH revealed its localization to the pericentromeric regions of the chromosomes. The chromosomal distribution of 12-13P delivered additional chromosomal marker for B-genome diploids. The 18-24J repeat showed a dispersed organization in all of the chromosomes of the analyzed diploid species and the Eurasian tetraploids. In the American allotetraploids (C. quinoa, C. berlandieri) and Eurasian allohexaploids (e.g., C. album) very intense hybridization signals of 18-24J were observed only on 18 chromosomes that belong to the B subgenome of these polyploids. Combined cytogenetic and molecular analyses suggests that reorganization of these two repeats accompanied the diversification and speciation of diploid (especially A genome) and polyploid species of Chenopodium s.s.

Citace poskytuje Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc19000501
003      
CZ-PrNML
005      
20190121095110.0
007      
ta
008      
190107s2018 xxc f 000 0|eng||
009      
AR
024    7_
$a 10.1139/gen-2018-0044 $2 doi
035    __
$a (PubMed)30067084
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxc
100    1_
$a Orzechowska, Maja $u a Department of Plant Anatomy and Cytology, University of Silesia, Jagiellonska 28,40-032 Katowice, Poland.
245    10
$a Organization and evolution of two repetitive sequences, 18-24J and 12-13P, in the genome of Chenopodium (Amaranthaceae) / $c M. Orzechowska, M. Majka, H. Weiss-Schneeweiss, A. Kovařík, N. Borowska-Zuchowska, B. Kolano,
520    9_
$a The abundance and chromosomal organization of two repetitive sequences named 12-13P and 18-24J were analyzed in 24 diploid and nine polyploid species of Chenopodium s.l., with special attention to Chenopodium s.s. Both sequences were predominantly present in species of Chenopodium s.s.; however, differences in the amplification levels were observed among the species. The 12-13P repeat was highly amplified in all of the analyzed Eurasian species, whereas the American diploids showed a marked variation in the amplification levels. The 12-13P repeat contains a tandemly arranged 40 bp minisatellite element forming a large proportion of the genome of Chenopodium (up to 3.5%). FISH revealed its localization to the pericentromeric regions of the chromosomes. The chromosomal distribution of 12-13P delivered additional chromosomal marker for B-genome diploids. The 18-24J repeat showed a dispersed organization in all of the chromosomes of the analyzed diploid species and the Eurasian tetraploids. In the American allotetraploids (C. quinoa, C. berlandieri) and Eurasian allohexaploids (e.g., C. album) very intense hybridization signals of 18-24J were observed only on 18 chromosomes that belong to the B subgenome of these polyploids. Combined cytogenetic and molecular analyses suggests that reorganization of these two repeats accompanied the diversification and speciation of diploid (especially A genome) and polyploid species of Chenopodium s.s.
650    _2
$a Amaranthaceae $x genetika $7 D027703
650    12
$a molekulární evoluce $7 D019143
650    12
$a amplifikace genu $7 D005784
650    12
$a genom rostlinný $7 D018745
650    _2
$a minisatelitní repetice $7 D018598
650    _2
$a ploidie $7 D011003
655    _2
$a časopisecké články $7 D016428
700    1_
$a Majka, Maciej $u a Department of Plant Anatomy and Cytology, University of Silesia, Jagiellonska 28,40-032 Katowice, Poland.
700    1_
$a Weiss-Schneeweiss, Hanna $u b Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, Vienna, Austria.
700    1_
$a Kovařík, Ales $u c Department of Molecular Epigenetics, Institute of Biophysics, Academy of Sciences of the Czech Republic, Královopolská 135, CZ-61265 Brno, Czech Republic.
700    1_
$a Borowska-Zuchowska, Natalia $u a Department of Plant Anatomy and Cytology, University of Silesia, Jagiellonska 28,40-032 Katowice, Poland.
700    1_
$a Kolano, Bozena $u a Department of Plant Anatomy and Cytology, University of Silesia, Jagiellonska 28,40-032 Katowice, Poland.
773    0_
$w MED00001910 $t Genome $x 1480-3321 $g Roč. 61, č. 9 (2018), s. 643-652
856    41
$u https://pubmed.ncbi.nlm.nih.gov/30067084 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20190107 $b ABA008
991    __
$a 20190121095328 $b ABA008
999    __
$a ok $b bmc $g 1364570 $s 1038624
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2018 $b 61 $c 9 $d 643-652 $e 20180801 $i 1480-3321 $m Genome $n Genome (Ott., Print) $x MED00001910
LZP    __
$a Pubmed-20190107

Najít záznam

Citační ukazatele

Pouze přihlášení uživatelé

Možnosti archivace

Nahrávání dat ...