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Effects of host genetics and environmental conditions on fecal microbiota composition of pigs
T. Kubasova, L. Davidova-Gerzova, V. Babak, D. Cejkova, L. Montagne, N. Le-Floc'h, I. Rychlik,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu srovnávací studie, časopisecké články, práce podpořená grantem
NLK
Directory of Open Access Journals
od 2006
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Public Library of Science (PLoS)
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od 2006-12-01
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od 2006-10-01
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od 2006-01-01
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od 2006-01-01
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od 2008-01-01
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od 2006-12-01
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od 2006-12-01
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od 2006-12-01
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od 2006
- MeSH
- bakteriální RNA MeSH
- dieta * MeSH
- druhová specificita * MeSH
- feces mikrobiologie MeSH
- fyziologický stres fyziologie MeSH
- odstavení MeSH
- přijímání potravy MeSH
- RNA ribozomální 16S MeSH
- střevní mikroflóra genetika fyziologie MeSH
- Sus scrofa MeSH
- věkové faktory MeSH
- životní prostředí * MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- srovnávací studie MeSH
Since microbiota may influence the physiology of its host including body weight increase, growth rate or feed intake, in this study we determined the microbiota composition in high or low residual feed intake (HRFI and LRFI) pig lines, of different age and/or subjected to sanitary stress by sequencing the V3/V4 variable region of 16S rRNA genes. Allisonella, Megasphaera, Mitsuokella, Acidaminococcus (all belonging to Firmicutes/class Negativicutes), Lactobacillus, Faecalibacterium, Catenibacterium, Butyrivibrio, Erysipelotrichaceae, Holdemania, Olsenella and Collinsella were more abundant in HRFI pigs. On the other hand, 26 genera including Bacteroides, Clostridium sensu stricto, Oscillibacter, Paludibacter, Elusimicrobium, Bilophila, Pyramidobacter and TM7 genera, and Clostridium XI and Clostridium XIVa clusters were more abundant in LRFI than HRFI pigs. Adaptation of microbiota to new diet after weaning was slower in LRFI than in HRFI pigs. Sanitary stress was of relatively minor influence on pig microbiota composition in both tested lines although abundance of Helicobacter increased in LRFI pigs subjected to stress. Selection for residual feed intake thus resulted in a selection of fecal microbiota of different composition. However, we cannot conclude whether residual feed intake was directly affected by different microbiota composition or whether the residual feed intake and microbiota composition are two independent consequences of yet unknown genetic traits differentially selected in the pigs of the two lines.
Citace poskytuje Crossref.org
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