-
Je něco špatně v tomto záznamu ?
Functionally specific binding regions of microtubule-associated protein 2c exhibit distinct conformations and dynamics
K. Melková, V. Zapletal, S. Jansen, E. Nomilner, M. Zachrdla, J. Hritz, J. Nováček, M. Zweckstetter, MR. Jensen, M. Blackledge, L. Žídek,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
NLK
Free Medical Journals
od 2008 do Před 1 rokem
Freely Accessible Science Journals
od 1905 do Před 1 rokem
PubMed Central
od 2005
Europe PubMed Central
od 2005 do Před 1 rokem
Open Access Digital Library
od 1905-10-01
Open Access Digital Library
od 1905-10-01
ROAD: Directory of Open Access Scholarly Resources
od 1905
PubMed
29925592
DOI
10.1074/jbc.ra118.001769
Knihovny.cz E-zdroje
- MeSH
- difrakce rentgenového záření MeSH
- fosforylace MeSH
- konformace proteinů * MeSH
- lidé MeSH
- maloúhlový rozptyl MeSH
- plektin chemie metabolismus MeSH
- proteiny asociované s mikrotubuly chemie metabolismus MeSH
- src homologní domény MeSH
- vazba proteinů MeSH
- vazebná místa MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Microtubule-associated protein 2c (MAP2c) is a 49-kDa intrinsically disordered protein regulating the dynamics of microtubules in developing neurons. MAP2c differs from its sequence homologue Tau in the pattern and kinetics of phosphorylation by cAMP-dependent protein kinase (PKA). Moreover, the mechanisms through which MAP2c interacts with its binding partners and the conformational changes and dynamics associated with these interactions remain unclear. Here, we used NMR relaxation and paramagnetic relaxation enhancement techniques to determine the dynamics and long-range interactions within MAP2c. The relaxation rates revealed large differences in flexibility of individual regions of MAP2c, with the lowest flexibility observed in the known and proposed binding sites. Quantitative conformational analyses of chemical shifts, small-angle X-ray scattering (SAXS), and paramagnetic relaxation enhancement measurements disclosed that MAP2c regions interacting with important protein partners, including Fyn tyrosine kinase, plectin, and PKA, adopt specific conformations. High populations of polyproline II and α-helices were found in Fyn- and plectin-binding sites of MAP2c, respectively. The region binding the regulatory subunit of PKA consists of two helical motifs bridged by a more extended conformation. Of note, although MAP2c and Tau did not differ substantially in their conformations in regions of high sequence identity, we found that they differ significantly in long-range interactions, dynamics, and local conformation motifs in their N-terminal domains. These results highlight that the N-terminal regions of MAP2c provide important specificity to its regulatory roles and indicate a close relationship between MAP2c's biological functions and conformational behavior.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19012600
- 003
- CZ-PrNML
- 005
- 20190412124125.0
- 007
- ta
- 008
- 190405s2018 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1074/jbc.RA118.001769 $2 doi
- 035 __
- $a (PubMed)29925592
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Melková, Kateřina $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic. Masaryk University, Faculty of Science, National Centre for Biomolecular Research, Kamenice 5, 625 00 Brno, Czech Republic.
- 245 10
- $a Functionally specific binding regions of microtubule-associated protein 2c exhibit distinct conformations and dynamics / $c K. Melková, V. Zapletal, S. Jansen, E. Nomilner, M. Zachrdla, J. Hritz, J. Nováček, M. Zweckstetter, MR. Jensen, M. Blackledge, L. Žídek,
- 520 9_
- $a Microtubule-associated protein 2c (MAP2c) is a 49-kDa intrinsically disordered protein regulating the dynamics of microtubules in developing neurons. MAP2c differs from its sequence homologue Tau in the pattern and kinetics of phosphorylation by cAMP-dependent protein kinase (PKA). Moreover, the mechanisms through which MAP2c interacts with its binding partners and the conformational changes and dynamics associated with these interactions remain unclear. Here, we used NMR relaxation and paramagnetic relaxation enhancement techniques to determine the dynamics and long-range interactions within MAP2c. The relaxation rates revealed large differences in flexibility of individual regions of MAP2c, with the lowest flexibility observed in the known and proposed binding sites. Quantitative conformational analyses of chemical shifts, small-angle X-ray scattering (SAXS), and paramagnetic relaxation enhancement measurements disclosed that MAP2c regions interacting with important protein partners, including Fyn tyrosine kinase, plectin, and PKA, adopt specific conformations. High populations of polyproline II and α-helices were found in Fyn- and plectin-binding sites of MAP2c, respectively. The region binding the regulatory subunit of PKA consists of two helical motifs bridged by a more extended conformation. Of note, although MAP2c and Tau did not differ substantially in their conformations in regions of high sequence identity, we found that they differ significantly in long-range interactions, dynamics, and local conformation motifs in their N-terminal domains. These results highlight that the N-terminal regions of MAP2c provide important specificity to its regulatory roles and indicate a close relationship between MAP2c's biological functions and conformational behavior.
- 650 _2
- $a vazebná místa $7 D001665
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a proteiny asociované s mikrotubuly $x chemie $x metabolismus $7 D008869
- 650 _2
- $a fosforylace $7 D010766
- 650 _2
- $a plektin $x chemie $x metabolismus $7 D051190
- 650 _2
- $a vazba proteinů $7 D011485
- 650 12
- $a konformace proteinů $7 D011487
- 650 _2
- $a maloúhlový rozptyl $7 D053838
- 650 _2
- $a difrakce rentgenového záření $7 D014961
- 650 _2
- $a src homologní domény $7 D018909
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Zapletal, Vojtěch $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic. Masaryk University, Faculty of Science, National Centre for Biomolecular Research, Kamenice 5, 625 00 Brno, Czech Republic.
- 700 1_
- $a Jansen, Séverine $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic. Masaryk University, Faculty of Science, National Centre for Biomolecular Research, Kamenice 5, 625 00 Brno, Czech Republic.
- 700 1_
- $a Nomilner, Erik $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic. Masaryk University, Faculty of Science, National Centre for Biomolecular Research, Kamenice 5, 625 00 Brno, Czech Republic.
- 700 1_
- $a Zachrdla, Milan $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic. Masaryk University, Faculty of Science, National Centre for Biomolecular Research, Kamenice 5, 625 00 Brno, Czech Republic.
- 700 1_
- $a Hritz, Jozef $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic.
- 700 1_
- $a Nováček, Jiří $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic.
- 700 1_
- $a Zweckstetter, Markus $u the Department of NMR-based Structural Biology, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany. the German Center for Neurodegenerative Diseases (DZNE), Von-Siebold-Strasse 3a, 37075 Göttingen, Germany, and.
- 700 1_
- $a Jensen, Malene R $u University Grenoble Alps, CEA, CNRS, 38000 Grenoble, France.
- 700 1_
- $a Blackledge, Martin $u University Grenoble Alps, CEA, CNRS, 38000 Grenoble, France.
- 700 1_
- $a Žídek, Lukáš $u From Masaryk University, Central European Institute of Technology, Kamenice 5, 625 00 Brno, Czech Republic, lzidek@chemi.muni.cz. Masaryk University, Faculty of Science, National Centre for Biomolecular Research, Kamenice 5, 625 00 Brno, Czech Republic.
- 773 0_
- $w MED00002546 $t The Journal of biological chemistry $x 1083-351X $g Roč. 293, č. 34 (2018), s. 13297-13309
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/29925592 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190405 $b ABA008
- 991 __
- $a 20190412124144 $b ABA008
- 999 __
- $a ok $b bmc $g 1391910 $s 1050905
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2018 $b 293 $c 34 $d 13297-13309 $e 20180620 $i 1083-351X $m The Journal of biological chemistry $n J Biol Chem $x MED00002546
- LZP __
- $a Pubmed-20190405