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Hypersaline sapropels act as hotspots for microbial dark matter
AŞ. Andrei, A. Baricz, MS. Robeson, MR. Păuşan, T. Tămaş, C. Chiriac, E. Szekeres, L. Barbu-Tudoran, EA. Levei, C. Coman, M. Podar, HL. Banciu,
Jazyk angličtina Země Anglie, Velká Británie
Typ dokumentu časopisecké články, práce podpořená grantem, Research Support, U.S. Gov't, Non-P.H.S.
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- MeSH
- Archaea klasifikace genetika izolace a purifikace MeSH
- Bacteroidetes genetika izolace a purifikace MeSH
- benzopyrany analýza MeSH
- Chloroflexi genetika izolace a purifikace MeSH
- DNA bakterií genetika MeSH
- fylogeneze MeSH
- geologické sedimenty mikrobiologie MeSH
- huminové látky analýza MeSH
- jezera mikrobiologie MeSH
- Proteobacteria genetika izolace a purifikace MeSH
- ribozomální DNA genetika MeSH
- sekvenční analýza DNA MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
- Geografické názvy
- Rumunsko MeSH
Present-day terrestrial analogue sites are crucial ground truth proxies for studying life in geochemical conditions close to those assumed to be present on early Earth or inferred to exist on other celestial bodies (e.g. Mars, Europa). Although hypersaline sapropels are border-of-life habitats with moderate occurrence, their microbiological and physicochemical characterization lags behind. Here, we study the diversity of life under low water activity by describing the prokaryotic communities from two disparate hypersaline sapropels (Transylvanian Basin, Romania) in relation to geochemical milieu and pore water chemistry, while inferring their role in carbon cycling by matching taxa to known taxon-specific biogeochemical functions. The polyphasic approach combined deep coverage SSU rRNA gene amplicon sequencing and bioinformatics with RT-qPCR and physicochemical investigations. We found that sapropels developed an analogous elemental milieu and harbored prokaryotes affiliated with fifty-nine phyla, among which the most abundant were Proteobacteria, Bacteroidetes and Chloroflexi. Containing thirty-two candidate divisions and possibly undocumented prokaryotic lineages, the hypersaline sapropels were found to accommodate one of the most diverse and novel ecosystems reported to date and may contribute to completing the phylogenetic branching of the tree of life.
Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA
Department for Internal Medicine Medical University of Graz Graz Austria
Department of Geology Faculty of Biology and Geology Babeş Bolyai University Cluj Napoca Romania
INCDO INOE 2000 Research Institute for Analytical Instrumentation Cluj Napoca Romania
Citace poskytuje Crossref.org
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- $a Andrei, Adrian-Ştefan $u Department of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania. stefan.andrei@ubbcluj.ro. Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Center of the Academy of Sciences of the Czech Republic, České Budějovice, Czech Republic. stefan.andrei@ubbcluj.ro.
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- $a Present-day terrestrial analogue sites are crucial ground truth proxies for studying life in geochemical conditions close to those assumed to be present on early Earth or inferred to exist on other celestial bodies (e.g. Mars, Europa). Although hypersaline sapropels are border-of-life habitats with moderate occurrence, their microbiological and physicochemical characterization lags behind. Here, we study the diversity of life under low water activity by describing the prokaryotic communities from two disparate hypersaline sapropels (Transylvanian Basin, Romania) in relation to geochemical milieu and pore water chemistry, while inferring their role in carbon cycling by matching taxa to known taxon-specific biogeochemical functions. The polyphasic approach combined deep coverage SSU rRNA gene amplicon sequencing and bioinformatics with RT-qPCR and physicochemical investigations. We found that sapropels developed an analogous elemental milieu and harbored prokaryotes affiliated with fifty-nine phyla, among which the most abundant were Proteobacteria, Bacteroidetes and Chloroflexi. Containing thirty-two candidate divisions and possibly undocumented prokaryotic lineages, the hypersaline sapropels were found to accommodate one of the most diverse and novel ecosystems reported to date and may contribute to completing the phylogenetic branching of the tree of life.
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