-
Something wrong with this record ?
Genome sequence of the opportunistic human pathogen Magnusiomyces capitatus
B. Brejová, H. Lichancová, F. Brázdovič, E. Hegedűsová, M. Forgáčová Jakúbková, V. Hodorová, V. Džugasová, A. Baláž, L. Zeiselová, A. Cillingová, M. Neboháčová, V. Raclavský, Ľ. Tomáška, BF. Lang, T. Vinař, J. Nosek,
Language English Country United States
Document type Journal Article
Grant support
APVV-14-0253
Agentúra na Podporu Výskumu a Vývoja
APVV-15-0022
Agentúra na Podporu Výskumu a Vývoja
VEGA 1/0458/18
Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
VEGA 1/0333/15
Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
VEGA 1/0052/16
Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
VEGA 1/0684/16
Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
UK/282/2018
Univerzita Komenského v Bratislave
UK/268/2018
Univerzita Komenského v Bratislave
UK/208/2018
Univerzita Komenského v Bratislave
RGPIN-2017-05411
Natural Sciences and Engineering Research Council of Canada
IGA_LF_2017_031
Univerzita Palackého v Olomouci
RVO 61989592
Univerzita Palackého v Olomouci
NLK
ProQuest Central
from 2003-01-01 to 1 year ago
Medline Complete (EBSCOhost)
from 2000-01-01 to 1 year ago
Health & Medicine (ProQuest)
from 2003-01-01 to 1 year ago
- MeSH
- Molecular Sequence Annotation MeSH
- Antifungal Agents pharmacology MeSH
- Virulence Factors MeSH
- Phenotype MeSH
- Phylogeny MeSH
- Genome, Fungal * MeSH
- Genomics * methods MeSH
- Humans MeSH
- Microbial Sensitivity Tests MeSH
- Multigene Family MeSH
- Mycoses microbiology MeSH
- Opportunistic Infections microbiology MeSH
- Recombination, Genetic MeSH
- Saccharomycetales classification genetics growth & development pathogenicity MeSH
- Computational Biology methods MeSH
- Check Tag
- Humans MeSH
- Publication type
- Journal Article MeSH
The yeast Magnusiomyces capitatus is an opportunistic human pathogen causing rare yet severe infections, especially in patients with hematological malignancies. Here, we report the 20.2 megabase genome sequence of an environmental strain of this species as well as the genome sequences of eight additional isolates from human and animal sources providing an insight into intraspecies variation. The distribution of single-nucleotide variants is indicative of genetic recombination events, supporting evidence for sexual reproduction in this heterothallic yeast. Using RNAseq-aided annotation, we identified genes for 6518 proteins including several expanded families such as kexin proteases and Hsp70 molecular chaperones. Several of these families are potentially associated with the ability of M. capitatus to infect and colonize humans. For the purpose of comparative analysis, we also determined the genome sequence of a closely related yeast, Magnusiomyces ingens. The genome sequences of M. capitatus and M. ingens exhibit many distinct features and represent a basis for further comparative and functional studies.
Faculty of Mathematics Physics and Informatics Comenius University in Bratislava Bratislava Slovakia
Faculty of Medicine and Dentistry Palacky University Olomouc Olomouc Czech Republic
Faculty of Natural Sciences Comenius University in Bratislava Bratislava Slovakia
Robert Cedergren Centre for Bioinformatics and Genomics Université de Montréal Montréal QC Canada
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19034895
- 003
- CZ-PrNML
- 005
- 20191014093228.0
- 007
- ta
- 008
- 191007s2019 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1007/s00294-018-0904-y $2 doi
- 035 __
- $a (PubMed)30456648
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Brejová, Bronislava $u Faculty of Mathematics, Physics, and Informatics, Comenius University in Bratislava, Bratislava, Slovakia. brejova@dcs.fmph.uniba.sk.
- 245 10
- $a Genome sequence of the opportunistic human pathogen Magnusiomyces capitatus / $c B. Brejová, H. Lichancová, F. Brázdovič, E. Hegedűsová, M. Forgáčová Jakúbková, V. Hodorová, V. Džugasová, A. Baláž, L. Zeiselová, A. Cillingová, M. Neboháčová, V. Raclavský, Ľ. Tomáška, BF. Lang, T. Vinař, J. Nosek,
- 520 9_
- $a The yeast Magnusiomyces capitatus is an opportunistic human pathogen causing rare yet severe infections, especially in patients with hematological malignancies. Here, we report the 20.2 megabase genome sequence of an environmental strain of this species as well as the genome sequences of eight additional isolates from human and animal sources providing an insight into intraspecies variation. The distribution of single-nucleotide variants is indicative of genetic recombination events, supporting evidence for sexual reproduction in this heterothallic yeast. Using RNAseq-aided annotation, we identified genes for 6518 proteins including several expanded families such as kexin proteases and Hsp70 molecular chaperones. Several of these families are potentially associated with the ability of M. capitatus to infect and colonize humans. For the purpose of comparative analysis, we also determined the genome sequence of a closely related yeast, Magnusiomyces ingens. The genome sequences of M. capitatus and M. ingens exhibit many distinct features and represent a basis for further comparative and functional studies.
- 650 _2
- $a antifungální látky $x farmakologie $7 D000935
- 650 _2
- $a výpočetní biologie $x metody $7 D019295
- 650 12
- $a genom fungální $7 D016681
- 650 12
- $a genomika $x metody $7 D023281
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a mikrobiální testy citlivosti $7 D008826
- 650 _2
- $a anotace sekvence $7 D058977
- 650 _2
- $a multigenová rodina $7 D005810
- 650 _2
- $a mykózy $x mikrobiologie $7 D009181
- 650 _2
- $a oportunní infekce $x mikrobiologie $7 D009894
- 650 _2
- $a fenotyp $7 D010641
- 650 _2
- $a fylogeneze $7 D010802
- 650 _2
- $a rekombinace genetická $7 D011995
- 650 _2
- $a Saccharomycetales $x klasifikace $x genetika $x růst a vývoj $x patogenita $7 D004718
- 650 _2
- $a faktory virulence $7 D037521
- 655 _2
- $a časopisecké články $7 D016428
- 700 1_
- $a Lichancová, Hana $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Brázdovič, Filip $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Hegedűsová, Eva $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia. Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic.
- 700 1_
- $a Forgáčová Jakúbková, Michaela $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Hodorová, Viktória $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Džugasová, Vladimíra $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Baláž, Andrej $u Faculty of Mathematics, Physics, and Informatics, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Zeiselová, Lucia $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Cillingová, Andrea $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Neboháčová, Martina $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Raclavský, Vladislav $u Faculty of Medicine and Dentistry, Palacky University Olomouc, Olomouc, Czech Republic.
- 700 1_
- $a Tomáška, Ľubomír $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Lang, B Franz $u Robert Cedergren Centre for Bioinformatics and Genomics, Université de Montréal, Montréal, QC, Canada.
- 700 1_
- $a Vinař, Tomáš $u Faculty of Mathematics, Physics, and Informatics, Comenius University in Bratislava, Bratislava, Slovakia.
- 700 1_
- $a Nosek, Jozef $u Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia. jozef.nosek@uniba.sk.
- 773 0_
- $w MED00001271 $t Current genetics $x 1432-0983 $g Roč. 65, č. 2 (2019), s. 539-560
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/30456648 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20191007 $b ABA008
- 991 __
- $a 20191014093652 $b ABA008
- 999 __
- $a ok $b bmc $g 1451555 $s 1073445
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2019 $b 65 $c 2 $d 539-560 $e 20181119 $i 1432-0983 $m Current genetics $n Curr Genet $x MED00001271
- GRA __
- $a APVV-14-0253 $p Agentúra na Podporu Výskumu a Vývoja
- GRA __
- $a APVV-15-0022 $p Agentúra na Podporu Výskumu a Vývoja
- GRA __
- $a VEGA 1/0458/18 $p Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
- GRA __
- $a VEGA 1/0333/15 $p Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
- GRA __
- $a VEGA 1/0052/16 $p Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
- GRA __
- $a VEGA 1/0684/16 $p Vedecká Grantová Agentúra MŠVVaŠ SR a SAV
- GRA __
- $a UK/282/2018 $p Univerzita Komenského v Bratislave
- GRA __
- $a UK/268/2018 $p Univerzita Komenského v Bratislave
- GRA __
- $a UK/208/2018 $p Univerzita Komenského v Bratislave
- GRA __
- $a RGPIN-2017-05411 $p Natural Sciences and Engineering Research Council of Canada
- GRA __
- $a IGA_LF_2017_031 $p Univerzita Palackého v Olomouci
- GRA __
- $a RVO 61989592 $p Univerzita Palackého v Olomouci
- LZP __
- $a Pubmed-20191007