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Comparative genomics of Leishmania (Mundinia)
A. Butenko, AY. Kostygov, J. Sádlová, Y. Kleschenko, T. Bečvář, L. Podešvová, DH. Macedo, D. Žihala, J. Lukeš, PA. Bates, P. Volf, FR. Opperdoes, V. Yurchenko,
Jazyk angličtina Země Velká Británie
Typ dokumentu časopisecké články
Grantová podpora
OPVVV 16_019/0000759
European Regional Development Fund
OPVVV 16_019/0000759
European Regional Development Fund
OPVVV 16_019/0000759
European Regional Development Fund
OPVVV 16_019/0000759
European Regional Development Fund
OPVVV 16_019/0000759
European Regional Development Fund
17-10656S
Grantová Agentura České Republiky (CZ)
SGS08/PrF/2019
Ostravská Univerzita v Ostravě
SGS08/PrF/2019
Ostravská Univerzita v Ostravě
SGS08/PrF/2019
Ostravská Univerzita v Ostravě (CZ)
17-10656S
Russian Science Foundation
NLK
BioMedCentral
od 2000-12-01
BioMedCentral Open Access
od 2000
Directory of Open Access Journals
od 2000
Free Medical Journals
od 2000
PubMed Central
od 2000
Europe PubMed Central
od 2000 do 2020
ProQuest Central
od 2009-01-01
Open Access Digital Library
od 2000-07-01
Open Access Digital Library
od 2000-01-01
Open Access Digital Library
od 2000-01-01
Medline Complete (EBSCOhost)
od 2000-01-01
Health & Medicine (ProQuest)
od 2009-01-01
ROAD: Directory of Open Access Scholarly Resources
od 2000
Springer Nature OA/Free Journals
od 2000-12-01
- MeSH
- délka genomu MeSH
- fylogeneze MeSH
- genomika MeSH
- hostitelská specificita MeSH
- Leishmania klasifikace genetika MeSH
- molekulární evoluce MeSH
- ploidie MeSH
- protozoální proteiny genetika MeSH
- regulace genové exprese MeSH
- sekvenování celého genomu metody MeSH
- sekvenování exomu MeSH
- stanovení celkové genové exprese metody MeSH
- Publikační typ
- časopisecké články MeSH
BACKGROUND: Trypanosomatids of the genus Leishmania are parasites of mammals or reptiles transmitted by bloodsucking dipterans. Many species of these flagellates cause important human diseases with clinical symptoms ranging from skin sores to life-threatening damage of visceral organs. The genus Leishmania contains four subgenera: Leishmania, Sauroleishmania, Viannia, and Mundinia. The last subgenus has been established recently and remains understudied, although Mundinia contains human-infecting species. In addition, it is interesting from the evolutionary viewpoint, representing the earliest branch within the genus and possibly with a different type of vector. Here we analyzed the genomes of L. (M.) martiniquensis, L. (M.) enriettii and L. (M.) macropodum to better understand the biology and evolution of these parasites. RESULTS: All three genomes analyzed were approximately of the same size (~ 30 Mb) and similar to that of L. (Sauroleishmania) tarentolae, but smaller than those of the members of subgenera Leishmania and Viannia, or the genus Endotrypanum (~ 32 Mb). This difference was explained by domination of gene losses over gains and contractions over expansions at the Mundinia node, although only a few of these genes could be identified. The analysis predicts significant changes in the Mundinia cell surface architecture, with the most important ones relating to losses of LPG-modifying side chain galactosyltransferases and arabinosyltransferases, as well as β-amastins. Among other important changes were gene family contractions for the oxygen-sensing adenylate cyclases and FYVE zinc finger-containing proteins. CONCLUSIONS: We suggest that adaptation of Mundinia to different vectors and hosts has led to alternative host-parasite relationships and, thereby, made some proteins redundant. Thus, the evolution of genomes in the genus Leishmania and, in particular, in the subgenus Mundinia was mainly shaped by host (or vector) switches.
Biology Centre Institute of Parasitology Czech Academy of Sciences České Budejovice Czech Republic
Department of Parasitology Faculty of Science Charles University Prague Czech Republic
e Duve Institute Université Catholique de Louvain Brussels Belgium
Life Science Research Centre Faculty of Science University of Ostrava Ostrava Czech Republic
Citace poskytuje Crossref.org
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- $a BACKGROUND: Trypanosomatids of the genus Leishmania are parasites of mammals or reptiles transmitted by bloodsucking dipterans. Many species of these flagellates cause important human diseases with clinical symptoms ranging from skin sores to life-threatening damage of visceral organs. The genus Leishmania contains four subgenera: Leishmania, Sauroleishmania, Viannia, and Mundinia. The last subgenus has been established recently and remains understudied, although Mundinia contains human-infecting species. In addition, it is interesting from the evolutionary viewpoint, representing the earliest branch within the genus and possibly with a different type of vector. Here we analyzed the genomes of L. (M.) martiniquensis, L. (M.) enriettii and L. (M.) macropodum to better understand the biology and evolution of these parasites. RESULTS: All three genomes analyzed were approximately of the same size (~ 30 Mb) and similar to that of L. (Sauroleishmania) tarentolae, but smaller than those of the members of subgenera Leishmania and Viannia, or the genus Endotrypanum (~ 32 Mb). This difference was explained by domination of gene losses over gains and contractions over expansions at the Mundinia node, although only a few of these genes could be identified. The analysis predicts significant changes in the Mundinia cell surface architecture, with the most important ones relating to losses of LPG-modifying side chain galactosyltransferases and arabinosyltransferases, as well as β-amastins. Among other important changes were gene family contractions for the oxygen-sensing adenylate cyclases and FYVE zinc finger-containing proteins. CONCLUSIONS: We suggest that adaptation of Mundinia to different vectors and hosts has led to alternative host-parasite relationships and, thereby, made some proteins redundant. Thus, the evolution of genomes in the genus Leishmania and, in particular, in the subgenus Mundinia was mainly shaped by host (or vector) switches.
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