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Prediction of lithium response using clinical data
A. Nunes, R. Ardau, A. Berghöfer, A. Bocchetta, C. Chillotti, V. Deiana, J. Garnham, E. Grof, T. Hajek, M. Manchia, B. Müller-Oerlinghausen, M. Pinna, C. Pisanu, C. O'Donovan, G. Severino, C. Slaney, A. Suwalska, P. Zvolsky, P. Cervantes, M. Del...
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
Grantová podpora
Genome Canada - International
Dalhousie Department of Psychiatry Research Fund - International
64410
CIHR - Canada
Nova Scotia Health Research Foundation Scotia Scholars Graduate Scholarship - International
Killam Postgraduate Scholarship - International
64410
CIHR - Canada
PubMed
31667829
DOI
10.1111/acps.13122
Knihovny.cz E-zdroje
- MeSH
- antimanika terapeutické užití MeSH
- bipolární porucha farmakoterapie epidemiologie MeSH
- dospělí MeSH
- lidé středního věku MeSH
- lidé MeSH
- plocha pod křivkou MeSH
- poruchy iniciace a udržování spánku epidemiologie MeSH
- pravidla klinického rozhodování * MeSH
- progrese nemoci MeSH
- rizikové faktory MeSH
- ROC křivka MeSH
- sloučeniny lithia terapeutické užití MeSH
- strojové učení * MeSH
- věk při počátku nemoci MeSH
- výsledek terapie MeSH
- Check Tag
- dospělí MeSH
- lidé středního věku MeSH
- lidé MeSH
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
OBJECTIVE: Promptly establishing maintenance therapy could reduce morbidity and mortality in patients with bipolar disorder. Using a machine learning approach, we sought to evaluate whether lithium responsiveness (LR) is predictable using clinical markers. METHOD: Our data are the largest existing sample of direct interview-based clinical data from lithium-treated patients (n = 1266, 34.7% responders), collected across seven sites, internationally. We trained a random forest model to classify LR-as defined by the previously validated Alda scale-against 180 clinical predictors. RESULTS: Under appropriate cross-validation procedures, LR was predictable in the pooled sample with an area under the receiver operating characteristic curve of 0.80 (95% CI 0.78-0.82) and a Cohen kappa of 0.46 (0.4-0.51). The model demonstrated a particularly low false-positive rate (specificity 0.91 [0.88-0.92]). Features related to clinical course and the absence of rapid cycling appeared consistently informative. CONCLUSION: Clinical data can inform out-of-sample LR prediction to a potentially clinically relevant degree. Despite the relevance of clinical course and the absence of rapid cycling, there was substantial between-site heterogeneity with respect to feature importance. Future work must focus on improving classification of true positives, better characterizing between- and within-site heterogeneity, and further testing such models on new external datasets.
Centro Lucio Bini Cagliari e Roma Italy
Charité Universitätsmedizin Berlin Berlin Germany
Department of Adult Psychiatry Poznan University of Medical Sciences Poznan Poland
Department of Mental Health Poznan University of Medical Sciences Poznan Poland
Department of Pharmacology Dalhousie University Halifax NS Canada
Department of Psychiatric Nursing Poznan University of Medical Sciences Poznan Poland
Department of Psychiatry Charles University Prague Czech Republic
Department of Psychiatry Dalhousie University Halifax NS Canada
Department of Psychiatry McGill University Health Centre Montreal QC Canada
Department of Psychiatry University of Toronto Toronto ON Canada
Faculty of Computer Science Dalhousie University Halifax NS Canada
Harvard Medical School and McLean Hospital Boston MA USA
Citace poskytuje Crossref.org
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- $a OBJECTIVE: Promptly establishing maintenance therapy could reduce morbidity and mortality in patients with bipolar disorder. Using a machine learning approach, we sought to evaluate whether lithium responsiveness (LR) is predictable using clinical markers. METHOD: Our data are the largest existing sample of direct interview-based clinical data from lithium-treated patients (n = 1266, 34.7% responders), collected across seven sites, internationally. We trained a random forest model to classify LR-as defined by the previously validated Alda scale-against 180 clinical predictors. RESULTS: Under appropriate cross-validation procedures, LR was predictable in the pooled sample with an area under the receiver operating characteristic curve of 0.80 (95% CI 0.78-0.82) and a Cohen kappa of 0.46 (0.4-0.51). The model demonstrated a particularly low false-positive rate (specificity 0.91 [0.88-0.92]). Features related to clinical course and the absence of rapid cycling appeared consistently informative. CONCLUSION: Clinical data can inform out-of-sample LR prediction to a potentially clinically relevant degree. Despite the relevance of clinical course and the absence of rapid cycling, there was substantial between-site heterogeneity with respect to feature importance. Future work must focus on improving classification of true positives, better characterizing between- and within-site heterogeneity, and further testing such models on new external datasets.
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