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Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential
MT. Rabanus-Wallace, B. Hackauf, M. Mascher, T. Lux, T. Wicker, H. Gundlach, M. Baez, A. Houben, KFX. Mayer, L. Guo, J. Poland, CJ. Pozniak, S. Walkowiak, J. Melonek, CR. Praz, M. Schreiber, H. Budak, M. Heuberger, B. Steuernagel, B. Wulff, A....
Language English Country United States
Document type Journal Article, Research Support, Non-U.S. Gov't
Grant support
BB/P016855/1
Biotechnology and Biological Sciences Research Council - United Kingdom
NLK
ProQuest Central
from 2000-01-01 to 1 year ago
Health & Medicine (ProQuest)
from 2000-01-01 to 1 year ago
Public Health Database (ProQuest)
from 2000-01-01 to 1 year ago
- MeSH
- Adaptation, Physiological genetics MeSH
- Stress, Physiological MeSH
- Genome, Plant * MeSH
- Genetic Introgression MeSH
- Plant Immunity genetics MeSH
- Karyotype MeSH
- Chromosome Mapping methods MeSH
- Triticum genetics MeSH
- Gene Expression Regulation, Plant MeSH
- Plant Proteins genetics metabolism MeSH
- Plant Breeding methods MeSH
- Crops, Agricultural genetics immunology MeSH
- Secale genetics immunology MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
Rye (Secale cereale L.) is an exceptionally climate-resilient cereal crop, used extensively to produce improved wheat varieties via introgressive hybridization and possessing the entire repertoire of genes necessary to enable hybrid breeding. Rye is allogamous and only recently domesticated, thus giving cultivated ryes access to a diverse and exploitable wild gene pool. To further enhance the agronomic potential of rye, we produced a chromosome-scale annotated assembly of the 7.9-gigabase rye genome and extensively validated its quality by using a suite of molecular genetic resources. We demonstrate applications of this resource with a broad range of investigations. We present findings on cultivated rye's incomplete genetic isolation from wild relatives, mechanisms of genome structural evolution, pathogen resistance, low-temperature tolerance, fertility control systems for hybrid breeding and the yield benefits of rye-wheat introgressions.
Aquatic and Crop Resource Development National Research Council Saskatoon Saskatchewan Canada
Canadian Grain Commission Winnipeg Manitoba Canada
Chinese Academy of Agricultural Sciences Beijing China
Federal University of Pernambuco Pernambuco Brazil
Georg August Universität Göttingen Göttingen Germany
Huazhong Agricultural University Wuhan China
HYBRO Saatzucht GmbH and Co KG Isernhagen Germany
Institute for Biosafety in Plant Biotechnology Julius Kühn Institut Quedlinburg Germany
Institute for Breeding Research on Agricultural Crops Julius Kühn Institut Sanitz Germany
Institute for Resistance Research and Stress Tolerance Julius Kühn Institute Quedlinburg Germany
Institute of Biotechnology and Viikki Plant Science Centre University of Helsinki Helsinki Finland
Institute of Experimental Botany of the Czech Academy of Sciences Olomouc Czech Republic
Kansas State University Manhattan KS USA
KWS SAAT SE and Co Einbeck Germany
Leibniz Institute of Plant Genetics and Crop Plant Research Seeland Germany
Montana BioAg Inc Durham NC USA
Noble Research Institute Ardmore OK USA
Plant Genome and Systems Biology Helmholtz Center Munich Neuherberg Germany
Production Systems Natural Resources Institute Finland Helsinki Finland
Sabanci University Tuzla Turkey
Saint Petersburg State University Saint Petersburg Russia
Technical University Munich Munich Germany
The University of Western Australia Crawley Western Australia Australia
TUM School of Life Sciences Weihenstephan Technical University of Munich Freising Germany
University of Cukurova Cukurova Turkey
University of Maryland College Park MD USA
University of Saskatchewan Saskatoon Saskatchewan Canada
University of Zürich Zurich Switzerland
Vavilov Institute of General Genetics Russian Academy of Sciences Saint Petersburg Russia
Warsaw University of Life Sciences SGGW Warsaw Poland
West Pomeranian University of Technology Szczecin Szczecin Poland
References provided by Crossref.org
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