Identification of procaryotic developmental stages by statistical analyses of two-dimensional gel patterns
Jazyk angličtina Země Německo Médium print
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
9298656
DOI
10.1002/elps.1150180817
Knihovny.cz E-zdroje
- MeSH
- 2D gelová elektroforéza statistika a číselné údaje MeSH
- algoritmy MeSH
- bakteriální proteiny genetika izolace a purifikace MeSH
- databáze faktografické MeSH
- genom bakteriální MeSH
- interpretace statistických dat MeSH
- multivariační analýza MeSH
- peptidové mapování statistika a číselné údaje MeSH
- prokaryotické buňky MeSH
- shluková analýza MeSH
- Streptomyces chemie genetika růst a vývoj MeSH
- vývojová regulace genové exprese MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- bakteriální proteiny MeSH
Multivariate statistical comparisons of two-dimensional protein (2-D) gel patterns were used for the first time to define stages of a biological developmental system. The differentiating procaryote, Streptomyces coelicolor, was radiolabeled in liquid cultures at 16 intervals during development, and radioactive proteins were separated and quantified on 2-D gels. Cluster, principal component, and correlation analyses classified these gel patterns into four distinct groups, each reflecting a pattern of gene expression specific for a stage of development. These studies focused our attention on a phase of arrested growth as a key regulatory transition leading to secondary metabolism and a phase of renewed growth. Proteins whose synthesis was switched on or off during the "transitional" phase (some 21 and 18, respectively) were identified and will be the focus of future studies designed to identify their physiological or regulatory function.
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General and molecular microbiology and microbial genetics in the IM CAS