Hydrogen bonding effects on the (15)N and (1)H shielding tensors in nucleic acid base pairs
Jazyk angličtina Země Spojené státy americké Médium print
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
10873505
DOI
10.1006/jmre.2000.2091
PII: S1090-7807(00)92091-3
Knihovny.cz E-zdroje
- MeSH
- cytosin chemie MeSH
- guanin chemie MeSH
- izotopy dusíku MeSH
- magnetická rezonanční spektroskopie metody MeSH
- párování bází * MeSH
- vodík MeSH
- vodíková vazba MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- cytosin MeSH
- guanin MeSH
- izotopy dusíku MeSH
- vodík MeSH
The results of systematic ab initio calculations of (15)N and (1)H chemical shielding tensors in the GC base pair as a function of hydrogen bond length are presented for the first time. The hydrogen bond length characterized by the distance r(N...N) between purine N1 and pyrimidine N3 was varied between 2.57 and 3.50 A and the chemical shift tensors were calculated by the sum-over-states density functional perturbation theory. It is shown that the hydrogen bond length has a strong effect on the chemical shielding tensor of both imino proton and nitrogen, on their orientation, and, as a consequence, on the relaxation properties of both nuclei. For a nitrogen nucleus not involved in hydrogen bonding, the shielding tensor is nearly axially symmetric and almost collinear with the bond vector. As the length of the hydrogen bond decreases, the least shielding component sigma(11) deflects from the N-H vector and the shielding tensor becomes increasingly asymmetric. The significance of the presented results for the analysis of relaxation data and the efficiency of TROSY effects together with a summary of the relevant shielding parameters are presented and discussed.
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