Formamide-based prebiotic synthesis of nucleobases: a kinetically accessible reaction route
Language English Country United States Media print-electronic
Document type Journal Article, Research Support, Non-U.S. Gov't, Research Support, U.S. Gov't, Non-P.H.S.
PubMed
22129168
DOI
10.1021/jp209886b
Knihovny.cz E-resources
- MeSH
- Models, Chemical MeSH
- Cyclization MeSH
- Formamides chemistry MeSH
- Imidazoles chemistry MeSH
- Catalysis MeSH
- Kinetics MeSH
- Quantum Theory MeSH
- Nucleic Acids chemistry MeSH
- Purines chemistry MeSH
- Pyrimidines chemistry MeSH
- Thermodynamics MeSH
- Water chemistry MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
- Names of Substances
- formamide MeSH Browser
- Formamides MeSH
- Imidazoles MeSH
- Nucleic Acids MeSH
- Purines MeSH
- Pyrimidines MeSH
- Water MeSH
Synthesis of nucleobases in nonaqueous environments is an alternative way for the emergence of terrestrial life, which could solve the fundamental problem connected to the hydrolytic instability of nucleic acid components in an aqueous environment. In this contribution, we present a plausible reaction route for the prebiotic synthesis of nucleobases in formamide, which does not require participation of the formamide trimer and aminoimidazole-carbonitrile intermediates. The computed activation energy of the proposed pathway is noticeably higher than that of the HCN-based synthetic route, but it is still feasible under the experimental conditions of the Saladino synthesis. We show that, albeit both the pyrimidine and purine ring formation utilizes the undissociated form of formamide, the dehydration product of formamide, HCN, may also play a key role in the mechanism. The rate determining step of the entire reaction path is the cyclization of the diaza-pentanimine precursor. The subsequent formation of the imidazole ring proceeds with a moderate activation energy. Our calculations thus demonstrate that the experimentally suggested reaction path without the involvement of aminoimidazole-carbonitrile intermediates is also a viable alternative for the nonaqueous synthesis of nucleobases.
References provided by Crossref.org
A Computational Quantum-Based Perspective on the Molecular Origins of Life's Building Blocks