Two newly recognized species of Hemidactylus (Squamata, Gekkonidae) from the Arabian Peninsula and Sinai, Egypt

. 2013 ; (355) : 79-107. [epub] 20131125

Status PubMed-not-MEDLINE Jazyk angličtina Země Bulharsko Médium electronic-ecollection

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid24363570

A recent molecular phylogeny of the Arid clade of the genus Hemidactylus revealed that the recently described H. saba and two unnamed Hemidactylus species from Sinai, Saudi Arabia and Yemen form a well-supported monophyletic group within the Arabian radiation of the genus. The name 'Hemidactylus saba species group' is suggested for this clade. According to the results of morphological comparisons and the molecular analyses using two mitochondrial (12S and cytb) and four nuclear (cmos, mc1r, rag1, rag2) genes, the name Hemidactylus granosus Heyden, 1827 is resurrected from the synonymy of H. turcicus for the Sinai and Saudi Arabian species. The third species of this group from Yemen is described formally as a new species H. ulii sp. n. The phylogenetic relationships of the members of 'Hemidactylus saba species group' are evaluated and the distribution and ecology of individual species are discussed.

Zobrazit více v PubMed

Akaike H. (1973) Information theory and an extension of the maximum likelihood principle. In: Petrov BN, Csaki F. (Eds) Second International Symposium on Information Theory. Akademiai Kiado, Budapest, Hungary, 267–281.

Anderson J. (1898) Zoology of Egypt. Vol. I. Reptilia and Batrachia. Bernard Quaritch, London, 371 pp.

Anderson SC. (1999) The lizards of Iran. Society for the Study of Amphibians and Reptiles, 442 pp. + 425 colour plates..

Arnold EN. (1986) A key and annotated check-list to the lizards and amphisbaenians of Arabia. Fauna of Saudi Arabia 8: 385-435.

Baha El Din S. (2006) A guide to the Reptiles and Amphibians of Egypt. The American University in Cairo Press, Cairo – New York, 359 pp.

Baha El Din SM. (2005) An overview of Egyptian species of Hemidactylus (Gekkonidae), with the description of a new species from the high mountains of South Sinai. Zoology in the Middle East 34: 27-34. doi: 10.1080/09397140.2005.10638078 DOI

Balletto E, Cherchi MA, Gasperetti J. (1985) Amphibians of the Arabian Peninsula. Fauna of Saudi Arabia 7: 318-392.

Boettger O. (1893) Katalog der Reptilien-Sammlung im Museum der Senckenbergischen Naturforschenden Gesellschaft in Frankfurt am Main. I. Teil. (Rhynchocephalen, Schildkröten, Krokodile, Eidechsen, Chamäleons). Frankfurt am Main, 140 pp.

Boulenger GA. (1885) Catalogue of the lizards in the British Museum (Natural History). Vol. I. Geckonidae, Eublepharidae, Uroplatidae, Pygopodidae, Agamidae. Trustees of the British Museum, London, 436 pp.

Busais S, Joger U. (2011a) Molecular phylogeny of the gecko genus Hemidactylus Oken, 1817 on the mainland of Yemen (Reptilia: Gekkonidae). Zoology in the Middle East 53: 25-34. doi: 10.1080/09397140.2011.10648859 DOI

Busais SM, Joger U. (2011b) Three new species of Hemidactylus Oken, 1817 from Yemen (Squamata, Gekkonidae). Vertebrate Zoology 61: 267-280.

Carranza S, Arnold EN. (2006) Systematics, biogeography and evolution of Hemidactylus geckos (Reptilia: Gekkonidae) elucidated using mitochondrial DNA sequences. Molecular Phylogenetics and Evolution 38: 531-545. doi: 10.1016/j.ympev.2005.07.012 PubMed DOI

Carranza S, Arnold EN. (2012) A review of the geckos of the genus Hemidactylus (Squamata: Gekkonidae) from Oman based on morphology, mitochondrial and nuclear data, with descriptions of eight new species. Zootaxa 3378: 1-95.

Castresana J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17: 540-552. doi: 10.1093/oxfordjournals.molbev.a026334 PubMed DOI

Clement M, Posada D, Crandall KA. (2000) TCS: A computer program to estimate gene genealogies. Molecular Ecology 9: 1657-1659. doi: 10.1046/j.1365-294x.2000.01020.x PubMed DOI

Darriba D, Taboada GL, Doallo R, Posada D. (2012) JModelTest 2: More models, new heuristics and parallel computing. Nature Methods 9: 772. doi: 10.1038/nmeth.2109 PubMed DOI PMC

Felsenstein J. (1985) Confidence limits on Phylogenies: An approach using the bootstrap. Evolution 39: 783-791. doi: 10.2307/2408678 PubMed DOI

Ficetola GF, Bonardi A, Sindaco R, Padoa-Schioppa E. (2013) Estimating patterns of reptile biodiversity in remote regions. Journal of Biogeography 40: 1202-1211. doi: 10.1111/jbi.12060 DOI

Flot JF. (2010) Seqphase: A web tool for interconverting phase input/output files and fasta sequence alignments. Molecular Ecology Resources 10: 162-166. doi: 10.1111/j.1755-0998.2009.02732.x PubMed DOI

Fritz JP, Schütte F. (1987) Geckos der Gattungen Ptyodactylus und Hemidactylus aus der Arabischen Republik Jemen. Bonner zoologische Beiträge 38: 115-128.

Gasperetti J. (1988) Snakes of Arabia. Fauna of Saudi Arabia 9: 169-450.

Gasperetti J, Stimson AF, Miller JD, Ross JP, Gasperetti PR. (1993) Turtles of Arabia. Fauna of Saudi Arabia 13: 170-367.

Guindon S, Gascuel O. (2003) A simple, fast, and accurate algorithm to estimate large Phylogenies by maximum likelihood. Systematic Biology 52: 696-704. doi: 10.1080/10635150390235520 PubMed DOI

Gvoždík V, Moravec J, Klutsch C, Kotlik P. (2010) Phylogeography of the Middle Eastern tree frogs (Hyla, Hylidae, Amphibia) as inferred from nuclear and mitochondrial DNA variation, with a description of a new species. Molecular Phylogenetics and Evolution 55: 1146-1166. doi: 10.1016/j.ympev.2010.03.015 PubMed DOI

Harrison D, Bates P. (1991) The mammals of Arabia. Harrison Zoological Museum, 354 pp.

Heyden CHGv. (1827) Reptilien. In: Rüppell E. (Ed) Atlas zu der Reise im nördlichen Africa von Eduard Rüppell. Heinrich Ludwig Brönner, Frankfurt am Main, 1-24.

Huelsenbeck JP, Rannala B. (2004) Frequentist properties of bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models. Systematic Biology 53: 904–913. doi: 10.1080/10635150490522629 PubMed DOI

Joly S, Stevens MI, van Vuuren BJ. (2007) Haplotype networks can be misleading in the presence of missing data. Systematic Biology 56: 857-862. doi: 10.1080/10635150701633153 PubMed DOI

Katoh K, Toh H. (2008) Recent developments in the MAFFT multiple sequence alignment program. Briefings in Bioinformatics 9: 286-298. doi: 10.1093/bib/bbn013 PubMed DOI

Klausewitz W. (2002) Frankfurt versus Berlin: The Red Sea explorers Wilhelm Hemprich, Christian Ehrenberg and Eduard Rüppell. Zoology in the Middle East 27: 7-12. doi: 10.1080/09397140.2002.10637935 DOI

Loveridge A. (1947) Revision of the african lizards of the family Gekkonidae. Bulletin of The Museum of Comparative Zoology 98: 1-469.

Mertens R. (1967) Die herpetologische Sektion des Natur-Museums und Forschungs-Institutes Senckenberg in Frankfurt a. M. nebst einem Verzeichnis ihrer Typen. Senckenbergiana Biologica 48: 1-106. PubMed

Mertens R, Wermuth H. (1960) Die Amphibien und Reptilien Europas. Waldemar Kramer, Frankfurt am Main, 264 pp.

Moravec J, Böhme W. (1997) A new subspecies of the Mediterranean gecko, Hemidactylus turcicus from the Syrian lava desert. Herpetozoa 10: 121-128.

Moravec J, Kratochvíl L, Amr ZS, Jandzik D, Šmíd J, Gvoždík V. (2011) High genetic differentiation within the Hemidactylus turcicus complex (Reptilia: Gekkonidae) in the Levant, with comments on the phylogeny and systematics of the genus. Zootaxa 2894: 21-38.

Rato C, Carranza S, Harris DJ. (2011) When selection deceives phylogeographic interpretation: The case of the Mediterranean house gecko, Hemidactylus turcicus (Linnaeus, 1758). Molecular Phylogenetics and Evolution 58: 365-373. doi: 10.1016/j.ympev.2010.12.004 PubMed DOI

Ronquist F, Teslenko M, Van Der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. (2012) MrBayes 3.2: Efficient bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542. doi: 10.1093/sysbio/sys029 PubMed DOI PMC

Rösler H, Wranik W. (1998) Beiträge zur Herpetologie der Republik Jemen. 3. Geckos des südlichen Jemen und der Insel Sokotra. Zoologische Abhandlungen Staatliches Museum fur Tierkunde Dresden 21: 113-132.

Rüppell E. (1826–1828) Atlas zu der Reise im nördlichen Afrika. Heinrich Ludwig Brönner, Frankfurt am Main, 622 pp.

Rüppell E. (1845) Verzeichniss der in dem Museum der Senckenbergischen naturforschenden Gesellschaft aufgestellten Sammlungen. Dritte Abteilung: Amphibien. Museum Senckenberg, Frankfurt am Main, 293–316.

Salvador A. (1981) Hemidactylus turcicus. In: Böhme W. (Ed) Handbuch der Reptilien und Amphibien Europas, 84–107.

Scott H. (1942) In the high Yemen. John Murray, London, 260 pp.

Silvestro D, Michalak I. (2012) RaxmlGUI: A graphical front-end for RAxML. Organisms Diversity and Evolution 12: 335-337. doi: 10.1007/s13127-011-0056-0 DOI

Šmíd J, Carranza S, Kratochvíl L, Gvoždík V, Nasher AK, Moravec J. (2013) Out of Arabia: A Complex Biogeographic History of Multiple Vicariance and Dispersal Events in the Gecko Genus Hemidactylus (Reptilia: Gekkonidae). PLoS ONE 8(5): e64018. doi: 10.1371/journal.pone.0064018 PubMed DOI PMC

Stamatakis A. (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. doi: 10.1093/bioinformatics/btl446 PubMed DOI

Stephens M, Smith NJ, Donnelly P. (2001) A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics 68: 978-989. doi: 10.1086/319501 PubMed DOI PMC

Talavera G, Castresana J. (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology 56: 564–577. doi: 10.1080/10635150701472164 PubMed DOI

Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731-2739. doi: 10.1093/molbev/msr121 PubMed DOI PMC

Torki F, Manthey U, Barts M. (2011) A new Hemidactylus from Lorestan Province, western Iran, with notes on Hemidactylus robustus Heyden, 1827 (Reptilia: Squamata: Gekkonidae). Sauria 33: 47-56.

Uetz P. (2013) The Reptile database. http://www.reptile-database.org/

Wagner RK. (2008) Eduard Rüppell – Leben und Werk eines Forschungsreisenden. Papageien 7: 244-249.

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...