Complete Genome Sequence of Pragia fontium 24613, an Environmental Bacterium from the Family Enterobacteriaceae

. 2015 Jul 09 ; 3 (4) : . [epub] 20150709

Status PubMed-not-MEDLINE Jazyk angličtina Země Spojené státy americké Médium electronic

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid26159528

The complete genome sequence of Pragia fontium 24613 was determined using PacBio RSII, Roche 454, and SOLiD sequencing. A total of 3,579 genes were predicted, including 3,338 protein-coding sequences and 146 pseudogenes. This is the first whole-genome sequence of a strain belonging to the environmental genera of the family Enterobacteriaceae.

Zobrazit více v PubMed

Aldová E, Hausner O, Kocmoud Z, Schindler J, Petráš P. 1988. A new member of the family Enterobacteriaceae—Pragia fontium. J Hyg Epidemiol Microbiol Immunol 32:433–436. PubMed

Chin CS, Alexander DH, Marks P, Klammer AA, Drake J, Heiner C, Clum A, Copeland A, Huddleston J, Eichler EE, Turner SW, Korlach J. 2013. Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nat Methods 10:563–569. doi:10.1038/nmeth.2474. PubMed DOI

Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, Thierer T, Ashton B, Meintjes P, Drummond A. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647–1649. doi:10.1093/bioinformatics/bts199. PubMed DOI PMC

Gao F, Zhang CT. 2008. Ori-Finder: a Web-based system for finding oriCs in unannotated bacterial genomes. BMC Bioinformatics 9:79. doi:10.1186/1471-2105-9-79. PubMed DOI PMC

Spaepen S, Vanderleyden J. 2011. Auxin and plant-microbe interactions. Cold Spring Harb Perspect Biol 2:a002428. doi:10.1101/cshperspect.a001438. PubMed DOI PMC

Nejnovějších 20 citací...

Zobrazit více v
Medvik | PubMed

Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling

. 2017 ; 13 () : 1176934317700863. [epub] 20170330

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...