Virtual screening, docking, and dynamics of potential new inhibitors of dihydrofolate reductase from Yersinia pestis
Language English Country Great Britain, England Media print-electronic
Document type Journal Article
- Keywords
- Yersinia pestis, YpDHFR, docking, molecular dynamics, plague, selective inhibition, virtual screening,
- MeSH
- Folic Acid Antagonists chemistry MeSH
- Tetrahydrofolate Dehydrogenase chemistry MeSH
- Catalytic Domain MeSH
- Ligands MeSH
- Molecular Conformation MeSH
- Drug Design * MeSH
- Molecular Dynamics Simulation * MeSH
- Molecular Docking Simulation * MeSH
- Protein Binding MeSH
- Binding Sites MeSH
- Hydrogen Bonding MeSH
- Yersinia pestis enzymology MeSH
- Publication type
- Journal Article MeSH
- Names of Substances
- Folic Acid Antagonists MeSH
- Tetrahydrofolate Dehydrogenase MeSH
- Ligands MeSH
In the present work, we propose to design drugs that target the enzyme dihydrofolate redutase (DHFR) as a means of a novel drug therapy against plague. Potential inhibitors of DHFR from Yersinia pestis (YpDHFR) were selected by virtual screening and subjected to docking, molecular dynamics (MD) simulations, and Poisson-Boltzmann surface area method, in order to evaluate their interactions in the active sites of YpDHFR and human DHFR (HssDHFR). The results suggested selectivity for three compounds that were further used to propose the structures of six new potential selective inhibitors for YpDHFR.
b Department of Chemistry Federal University of Viçosa Viçosa MG 36570 000 Brazil
c Department of Chemistry and Biochemistry Concordia University Montreal QC Canada
Faculty of Technology University of the State of Rio de Janeiro Resende RJ 27 537 000 Brazil
References provided by Crossref.org
In Silico Studies of Potential Selective Inhibitors of Thymidylate Kinase from Variola virus