Targeting mutations to the plastidial psbA gene of Chlamydomonas reinhardtii without direct positive selection

. 2019 May 14 ; 9 (1) : 7367. [epub] 20190514

Jazyk angličtina Země Anglie, Velká Británie Médium electronic

Typ dokumentu časopisecké články, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/pmid31089169
Odkazy

PubMed 31089169
PubMed Central PMC6517589
DOI 10.1038/s41598-019-42617-9
PII: 10.1038/s41598-019-42617-9
Knihovny.cz E-zdroje

Targeting mutations to specific genomic loci is invaluable for assessing in vivo the effect of these changes on the biological role of the gene in study. Here, we attempted to introduce a mutation that was previously implicated in an increased heat stability of the mesophilic cyanobacterium Synechocystis sp. PCC6803 via homologous recombination to the psbA gene of Chlamydomonas reinhardtii. For that, we established a strategy for targeted mutagenesis that was derived from the efficient genome-wide homologous-recombination-based methodology that was used to target individual genes of Saccharomyces cerevisiae. While the isolated mutants did not show any benefit under elevated temperature conditions, the new strategy proved to be efficient for C. reinhardtii even in the absence of direct positive selection.

Zobrazit více v PubMed

Grossman AR. Chlamydomonas reinhardtii and photosynthesis: genetics to genomics. Curr Opin Plant Biol. 2000;3:132–137. doi: 10.1016/S1369-5266(99)00053-9. PubMed DOI

Harris EH. Chlamydomonas as a model organism. Annu Rev Plant Physiol Plant Mol Biol. 2001;52:363–406. doi: 10.1146/annurev.arplant.52.1.363. PubMed DOI

Rochaix, J. D. Chlamydomonas. In Encyclopedia of Molecular Cell Biology and Molecular Medicine (ed. Meyers, R. A.) 619–645 (2nd edn. Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany, 2006).

Erickson JM, Rahire M, Rochaix JD. Chlamydomonas reinhardii gene for the 32000 mol. wt. protein of photosystem II contains four large introns and is located entirely within the chloroplast inverted repeat. EMBO J. 1984;3:2753–2762. doi: 10.1002/j.1460-2075.1984.tb02206.x. PubMed DOI PMC

Maul JE. The Chlamydomonas reinhardtii Plastid chromosome: islands of genes in a sea of repeats. Plant Cell Online. 2002;14:2659–2679. doi: 10.1105/tpc.006155. PubMed DOI PMC

Boynton J, et al. Chloroplast transformation in Chlamydomonas with high velocity microprojectiles. Science. 1988;240:1534–1538. doi: 10.1126/science.2897716. PubMed DOI

Fincham, J. R. Transformation in fungi. Microbiol Rev53, 148–170. D - NLM: PMC372721 EDAT- 1989/03/01 MHDA- 1989/03/01 00:01 CRDT- 1989/03/01 00:00 PST – ppublish (1989). PubMed PMC

Schaefer DG. Gene targeting in Physcomitrella patens. Curr Opin Plant Biol. 2001;4:143–150. doi: 10.1016/S1369-5266(00)00150-3. PubMed DOI

Przibilla E, Heiss S, Johanningmeier U, Trebst A. Site-specific mutagenesis of the D1 subunit of photosystem II in wild-type Chlamydomonas. Plant Cell. 1991;3:169–174. doi: 10.1105/tpc.3.2.169. PubMed DOI PMC

Kindle KL, Richards KL, Stern DB. Engineering the chloroplast genome: techniques and capabilities for chloroplast transformation in Chlamydomonas reinhardtii. Proc Natl Acad Sci USA. 1991;88:1721–1725. doi: 10.1073/pnas.88.5.1721. PubMed DOI PMC

Krech K, et al. Reverse genetics in complex multigene operons by co-transformation of the plastid genome and its application to the open reading frame previously designated psbN. The Plant J. 2013;75:1062–1074. doi: 10.1111/tpj.12256. PubMed DOI

Johanningmeier U, Heiss S. Construction of a Chlamydomonas reinhardtii mutant with an intronless psbA gene. Plant Mol Biol. 1993;22:91–99. doi: 10.1007/BF00038998. PubMed DOI

Mayfield SP, Cohen A, Danon A, Yohn CB. Translation of the psbA mRNA of Chlamydomonas reinhardtii requires a structured RNA element contained within the 5′ untranslated region. J Cell Biol. 1994;127:1537–1545. doi: 10.1083/jcb.127.6.1537. PubMed DOI PMC

Minagawa J, Crofts AR. A robust protocol for site-directed mutagenesis of the D1 protein in Chlamydomonas reinhardtii: A PCR-spliced psbA gene in a plasmid conferring spectinomycin resistance was introduced into a psbA deletion strain. Photosynth Res. 1994;42:121–131. doi: 10.1007/BF02187123. PubMed DOI

Dauvillee D, Hilbig L, Preiss S, Johanningmeier U. Minimal extent of sequence homology required for homologous recombination at the psbA locus in Chlamydomonas reinhardtii chloroplasts using PCR-generated DNA fragments. Photosynth Res. 2004;79:219–224. doi: 10.1023/B:PRES.0000015384.24958.a9. PubMed DOI

Ghaemmaghami S, et al. Global analysis of protein expression in yeast. Nature. 2003;425:737–741. doi: 10.1038/nature02046. PubMed DOI

Shlyk-Kerner O, et al. Protein flexibility acclimatizes photosynthetic energy conversion to the ambient temperature. Nature. 2006;442:827–830. doi: 10.1038/nature04947. PubMed DOI

Dinamarca J, et al. Double mutation in photosystem II reaction centers and elevated CO2 grant thermotolerance to mesophilic cyanobacterium. PLoS One. 2011;6:e28389. doi: 10.1371/journal.pone.0028389. PubMed DOI PMC

Berry J, Bjorkman O. Photosynthetic response and adaptation to temperature in higher-plants. Annu Rev Plant Physiol Plant Mol Biol. 1980;31:491–543. doi: 10.1146/annurev.pp.31.060180.002423. DOI

Newman SM, et al. Transformation of chloroplast ribosomal RNA genes in Chlamydomonas: molecular and genetic characterization of integration events. Genetics. 1990;126:875–888. PubMed PMC

Spreitzer RJ, Mets L. Photosynthesis-deficient mutants of Chlamydomonas reinhardii with associated light-sensitive phenotypes. Plant Physiol. 1981;67:565–569. doi: 10.1104/pp.67.3.565. PubMed DOI PMC

Gorman DS, Levine RP. Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardi. Proc Natl Acad Sci USA. 1965;54:1665–1669. doi: 10.1073/pnas.54.6.1665. PubMed DOI PMC

Sambrook, F E.F. & Maniatis, T. Molecular cloning: A laboratory manual. Cold spring harbor laboratory press, New York (1989).

Sueoka N. Mitotic Replication of deoxyribonucleic acid in Chlamydomonas reinhardi. Proc Natl Acad Sci USA. 1960;46:83–91. doi: 10.1073/pnas.46.1.83. PubMed DOI PMC

Bryksin A, Matsumura I. Overlap extension PCR cloning. Methods Mol Biol. 2013;1073:31–42. doi: 10.1007/978-1-62703-625-2_4. PubMed DOI

Erijman A, et al. Transfer-PCR (TPCR): a highway for DNA cloning and protein engineering. J Struct Biol. 2011;175:171–777. doi: 10.1016/j.jsb.2011.04.005. PubMed DOI

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...