Visualization and Analysis of Protein Structures with LiteMol Suite
Language English Country United States Media print
Document type Journal Article, Research Support, Non-U.S. Gov't
- Keywords
- Atom selection, Electron density, Ligand representation, Protein visualization, Validation report,
- MeSH
- Databases, Protein MeSH
- Internet MeSH
- Web Browser MeSH
- Protein Conformation * MeSH
- Proteins chemistry MeSH
- Software MeSH
- User-Computer Interface MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Geographicals
- Europe MeSH
- Names of Substances
- Proteins MeSH
LiteMol suite is an innovative solution that enables near-instant delivery of model and experimental biomacromolecular structural data, providing users with an interactive and responsive experience in all modern web browsers and mobile devices. LiteMol suite is a combination of data delivery services (CoordinateServer and DensityServer), compression format (BinaryCIF), and a molecular viewer (LiteMol Viewer). The LiteMol suite is integrated into Protein Data Bank in Europe (PDBe) and other life science web applications (e.g., UniProt, Ensemble, SIB, and CNRS services), it is freely available at https://litemol.org , and its source code is available via GitHub. LiteMol suite provides advanced functionality (annotations and their visualization, powerful selection features), and this chapter will describe their use for visual inspection of protein structures.
CEITEC Central European Institute of Technology Masaryk University Brno Brno Bohunice Czech Republic
National Centre for Biomolecular Research Faculty of Science Brno Bohunice Czech Republic
RCPTM Department of Physical Chemistry Faculty of Science Palacký University Olomouc Czech Republic
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