Experimental assessment of biotic and abiotic filters driving community composition
Status PubMed-not-MEDLINE Jazyk angličtina Země Anglie, Velká Británie Médium electronic-ecollection
Typ dokumentu časopisecké články
PubMed
32760534
PubMed Central
PMC7391324
DOI
10.1002/ece3.6461
PII: ECE36461
Knihovny.cz E-zdroje
- Klíčová slova
- Beals index, abiotic filter, biotic filter, competitive exclusion, sowing and transplanting experiment, species pool,
- Publikační typ
- časopisecké články MeSH
Species occurrence in a site can be limited by both the abiotic environment and biotic interactions. These two factors operate in concert, but their relative importance is often unclear. By experimentally introducing seeds or plants into competition-free gaps or into the intact vegetation, we can disentangle the biotic and abiotic effects on plant establishment. We established a seed-sowing/transplant experiment in three different meadows. Species were introduced, as seeds and pregrown transplants, into competition-free gaps and the intact vegetation. They included 12 resident plants from the locality and 18 species typical for different habitats. Last two years, gaps were overgrown with vegetation from surrounding plants and we observed the competitive exclusion of our focal plants. We compared plant survival with the expected occurrence in target locality (Beals index). Many of the species with habitat preferences different from our localities were able to successfully establish from seeds and grow in the focal habitat if competition was removed. They included species typical for much drier conditions. These species were thus not limited by the abiotic conditions, but by competition. Pregrown transplants were less sensitive to competition, when compared to seedlings germinated from seeds. Beals index significantly predicted both species success in gaps and the ability to withstand competition. Survival in a community is dependent on the adaptation to both the abiotic environment and biotic interactions. Statistically significant correlation coefficients of the ratio of seedling survival in vegetation and gaps with Beals index suggest the importance of biotic interactions as a determinant of plant community composition. To disentangle the importance of abiotic and biotic effect on plant establishment, it is important to distinguish between species pool as a set of species typically found in given community type (determined by Beals index) and a set of species for which the abiotic conditions are suitable.
Department of Botany Faculty of Science University of South Bohemia České Budějovice Czech Republic
Institute of Entomology Biology Centre Czech Academy of Sciences České Budějovice Czech Republic
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Adler, P. B. , Ellner, S. P. , & Levine, J. M. (2010). Coexistence of perennial plants: An embarrassment of niches. Ecology Letters, 13, 1019–1029. 10.1111/j.1461-0248.2010.01496.x PubMed DOI
Adler, P. B. , Fajardo, A. , Kleinhesselink, A. R. , & Kraft, N. J. B. (2013). Trait‐based tests of coexistence mechanisms. Ecology Letters, 16, 1294–1306. 10.1111/ele.12157 PubMed DOI
Araújo, M. B. , & Rozenfeld, A. (2014). The geographic scaling of biotic interactions. Ecography, 37, 406–415. 10.1111/j.1600-0587.2013.00643.x DOI
Bar‐Massada, A. (2015). Complex relationships between species niches and environmental heterogeneity affect species co‐occurrence patterns in modelled and real communities. Proceedings of the Royal Society B: Biological Sciences, 282, 20150927 10.1098/rspb.2015.0927 PubMed DOI PMC
Beals, E. W. (1984). Bray‐Curtis‐ordination: An effective strategy for analysis of multivariate ecological data. Advances in Ecological Research, 14, 1–55. 10.1016/S0065-2504(08)60168-3 DOI
Bennett, J. A. , Riibak, K. , Kook, E. , Reier, Ü. , Tamme, R. , Bueno, C. G. , & Pärtel, M. (2016). Species pools, community completeness and invasion: Disentangling diversity effects on the establishment of native and alien species. Ecology Letters, 19, 1496–1505. 10.1111/ele.12702 PubMed DOI
Botta‐Dukát, Z. (2012). Co‐occurrence‐based measure of species’ habitat specialization: Robust, unbiased estimation in saturated communities. Journal of Vegetation Science, 23, 201–207. 10.1111/j.1654-1103.2011.01347.x DOI
Boulangeat, I. , Gravel, D. , & Thuiller, W. (2012). Accounting for dispersal and biotic interactions to disentangle the drivers of species distributions and their abundances. Ecology Letters, 15(6), 584–593. 10.1111/j.1461-0248.2012.01772.x PubMed DOI PMC
Brown, J. J. , Mennicken, S. , Massante, J. C. , Dijoux, S. , Telea, A. , Benedek, A. M. , … de Bello, F. (2019). A novel method to predict dark diversity using unconstrained ordination analysis. Journal of Vegetation Science, 30, 610–619. 10.1111/jvs.12757 DOI
Butaye, J. , Jacquemyn, H. , Honnay, O. , & Hermy, M. (2001). The species pool concept applied to forests in a fragmented landscape: Dispersal limitation versus habitat limitation. Journal of Vegetation Science, 13, 27–34. 10.1111/j.1654-1103.2002.tb02020.x DOI
Cadotte, M. W. , & Tucker, C. M. (2017). Should environmental filtering be abandoned? Trends in Ecology and Evolution, 32, 429–437. 10.1016/j.tree.2017.03.004 PubMed DOI
Chytrý, M. , & Rafajová, M. (2003). Czech National Phytosociological Database: Basic statistics of the available vegetation‐plot data. Preslia, 75, 1–15.
Cornelissen, J. H. C. , Lavorel, S. , Garnier, E. , Díaz, S. , Buchmann, N. , Gurvich, D. E. , … Poorter, H. (2003). A handbook of protocols for standardised and easy measurement of plant functional traits worldwide. Australian Journal of Botany, 51, 335–380. 10.1071/BT02124 DOI
Cornell, H. V. , & Harrison, S. P. (2014). What are species pools and when are they important? Annual Reviews, 45, 45–67. 10.1146/annurev-ecolsys-120213-091759 DOI
D'Amen, M. , Mod, H. K. , Gotelli, N. J. , & Guisan, A. (2018). Disentangling biotic interactions, environmental filter, and dispersal limitation as drivers of species co‐occurrence. Ecography, 41, 1233–1244. 10.1111/ecog.03148 DOI
de Bello, F. , Price, J. N. , Münkemüller, T. , Liira, J. , Zobel, M. , Thuiller, W. , … Pärtel, M. (2012). Functional species pool framework to test for biotic effects on community assembly. Ecology, 93, 2263–2273. 10.1890/11-1394.1 PubMed DOI
Ehrlén, J. , Münzbergová, Z. , Diekmann, M. , & Eriksson, O. (2006). Long‐term assessment of seed limitation in plants: Results from an 11‐year experiment. Journal of Ecology, 94, 1224–1232. 10.1111/j.1365-2745.2006.01169.x DOI
Ewald, J. (2002). A probabilistic approach to estimating species pools from large compositional matrices. Journal of Vegetation Science, 13, 191–198. 10.1111/j.1654-1103.2002.tb02039.x DOI
Fibich, P. , Vítová, A. , & Lepš, J. (2018). Interaction between habitat limitation and dispersal limitation is modulated by species life history and external conditions: A stochastic matrix model approach. Community Ecology, 19, 9–20. 10.1556/168.2018.19.1.2 DOI
Frei, E. S. , Scheepens, J. F. , & Stöcklin, J. (2012). Dispersal and microsite limitation of a rare alpine plant. Plant Ecology, 213, 395–406. 10.1007/s11258-011-9984-1 DOI
Grubb, P. J. (1977). The maintenance of species‐richness in plant communities: The importance of the regeneration niche. Biological Reviews, 52, 107–145. 10.1111/j.1469-185X.1977.tb01347.x DOI
Gustafsson, C. , Ehrlén, J. , & Eriksson, O. (2002). Recruitment in Dentaria bulbifera; the roles of dispersal, habitat quality and mollusc herbivory. Journal of Vegetation Science, 13, 719–724. 10.1111/j.1654-1103.2002.tb02099.x DOI
HilleRisLambers, J. , Adler, P. B. , Harpole, W. S. , Levine, J. M. , & Mayfield, M. M. (2012). Rethinking community assembly through the lens of coexistence theory. The Annual Review of Ecology, Evolution, and Systematics, 43, 227–248. 10.1146/annurev-ecolsys-110411-160411 DOI
Houseman, G. R. , & Gross, K. L. (2006). Does ecological filtering across a productivity gradient explain variation in species pool‐richness relationships? Oikos, 115, 148–154. 10.1111/j.2006.0030-1299.14743.x DOI
Kotorová, I. , & Lepš, J. (1999). Comparative ecology of seedling recruitment in an oligotrophic wet meadow. Journal of Vegetation Science, 10, 175–186. 10.2307/3237139 DOI
Kraft, N. J. B. , Adler, P. B. , Godoy, O. , James, E. C. , Fuller, S. , & Levine, J. M. (2015). Community assembly, coexistence and the environmental filtering metaphor. Functional Ecology, 29, 592–599. 10.1111/1365-2435.12345 DOI
Lemke, T. , Janßen, A. , & Porembski, S. (2015). Multiple limitations to the persistence of Trollius europaeus in a fragmented agricultural landscape in the context of metapopulation theory. Plant Ecology, 216, 319–330. 10.1007/s11258-014-0439-3 DOI
Li, D. , Poisot, T. , Waller, D. M. , & Baiser, B. (2018). Homogenization of species composition and species association networks are decoupled. Global Ecology and Biogeography, 27, 1481–1491. 10.1111/geb.12825 DOI
Milden, M. , Münzbergová, Z. , Herben, T. , & Ehrlén, J. (2006). Metapopulation dynamics of a perennial plant, Succisa pratensis, in an agricultural landscape. Ecological Modelling, 199, 464–475. 10.1016/j.ecolmodel.2005.11.047 DOI
Moor, H. , Hylander, K. , & Norberg, J. (2015). Predicting climate change effects on wetland ecosystem services using species distribution modeling and plant functional traits. Ambio, 44, 113–126. 10.1007/s13280-014-0593-9 PubMed DOI PMC
Morales‐Castilla, I. , Matias, M. G. , Gravel, D. , & Araújo, M. B. (2015). Inferring biotic interactions from proxies. Trends in Ecology & Evolution, 30(6), 347–356. 10.1016/j.tree.2015.03.014 PubMed DOI
Mudrák, O. , Mládek, J. , Blažek, P. , Lepš, J. , Doležal, J. , Nekvapilová, E. , & Těšitel, J. (2014). Establishment of hemiparasitic Rhinanthus spp. in grassland restoration: Lessons learned from sowing experiments. Applied Vegetation Science, 17, 274–287. 10.1111/avsc.12073 DOI
Münzbergová, Z. , & Herben, T. (2004). Identification of suitable unoccupied habitats in metapopulation studies using co‐occurrence of species. Oikos, 105, 408–414. 10.1111/j.0030-1299.2004.13017.x DOI
Münzbergová, Z. , & Plačková, I. (2010). Seed mass and population characteristics interact to determine performance of Scorzonera hispanica under common garden conditions. Flora, 205, 552–559. 10.1016/j.flora.2010.04.001 DOI
Myers, J. A. , & Harms, K. E. (2011). Seed arrival and ecological filters interact to assemble high‐diversity plant communities. Ecology, 92(3), 676–686. 10.1890/10-1001.1 PubMed DOI
Oksanen, J. , Blanchet, F. G. , Friendly, M. , Kindt, R. , Legendre, P. , McGlinn, D. , & Wagner, H. (2019). vegan: Community Ecology Package. R package version 2.5‐4. Retrieved from https://CRAN.R‐project.org/package=vegan
Palmer, M. (1994). Variation in species richness: Towards a unification of hypotheses. Folia Geobotanica et Phytotaxonomica, 29, 511–530. 10.1007/BF02883148 DOI
Pärtel, M. , Szava‐Kovats, R. , & Zobel, M. (2013). Community completeness: Linking local and dark diversity within the species pool concept. Folia Geobotanica, 48, 307–317. 10.1007/s12224-013-9169-x DOI
Pärtel, M. , Zobel, M. , Zobel, K. , van der Maarel, E. , & Partel, M. (1996). The species pool and its relation to species richness: Evidence from Estonian plant communities. Oikos, 75, 111–117. 10.2307/3546327 DOI
Pollock, L. J. , Tingley, R. , Morris, W. K. , Golding, N. , O'Hara, R. B. , Parris, K. M. , … McCarthy, M. A. (2014). Understanding co‐occurrence by modelling species simultaneously with a Joint Species Distribution Model (JSDM). Methods in Ecology and Evolution, 5, 397–406. 10.1111/2041-210X.12180 DOI
Puerta‐Piñero, C. , Muller‐Landau, H. C. , Calderón, O. , & Wright, S. J. (2013). Seed arrival in tropical forest tree fall gaps. Ecology, 94(7), 1552–1562. 10.1890/12-1012.1 PubMed DOI
Sádlo, J. , Chytrý, M. , & Pyšek, P. (2007). Regional species pool of vascular plants in habitats of the Czech Republic. Preslia, 79, 303–321.
Sonnier, G. , Shipley, B. , & Navas, M. (2010). Plant traits, species pools and the prediction of relative abundance in plant communities: A maximum entropy approach. Journal of Vegetation Science, 21, 318–331. 10.1111/j.1654-1103.2009.01145.x DOI
StatSoft . (2015). STATISTICA (data analysis software system), version 13. – StatSoft Inc. Retrieved from www.statsoft.com
Švamberková, E. , Vítová, A. , & Lepš, J. (2017). The role of biotic interactions in plant community assembly: What is the community species pool? Acta Oecologica, 85, 150–156. 10.1016/j.actao.2017.10.011 DOI
Těšitel, J. , Fibich, P. , de Bello, F. , Chytrý, M. , & Lepš, J. (2015). Habitats and ecological niches of root‐hemiparasitic plants: An assessment based on a large database of vegetation plots. Preslia, 87, 87–108.
Tofts, R. , & Silvertown, J. (2002). Community assembly from the local species pool: An experimental study using congeneric species pairs. Journal of Ecology, 90, 385–393. 10.1046/j.1365-2745.2001.00673.x DOI
Turnbull, L. A. , Crawley, M. J. , & Rees, M. (2000). Are plant populations seed‐limited? A review of seed sowing experiments. Oikos, 88, 225–238. 10.1034/j.1600-0706.2000.880201.x DOI
Vítová, A. , & Lepš, J. (2011). Experimental assessment of dispersal and habitat limitation in an oligotrophic wet meadow. Plant Ecology, 212, 1231–1242. 10.1007/s11258-011-9900-8 DOI
Vítová, A. , Macek, P. , & Lepš, J. (2017). Disentangling the interplay of generative and vegetative propagation among different functional groups during gap colonization in meadows. Functional Ecology, 31, 458–468. 10.1111/1365-2435.12731 DOI
Wellstein, C. , Campetellab, G. , Spadac, F. , Chelli, S. , Mucinad, L. , Canullob, R. , & Barthae, S. (2014). Context‐dependent assembly rules and the role of dominating grasses in semi‐natural abandoned sub‐Mediterranean grasslands. Agriculture, Ecosystems and Environment, 182, 113–122. 10.1016/j.agee.2013.12.016 DOI
Wisz, M. S. , Pottier, J. , Kissling, W. D. , Pellissier, L. , Lenoir, J. , Damgaard, C. F. , … Svenning, J.‐C. (2013). The role of biotic interactions in shaping distributions and realised assemblages of species: Implications for species distribution modelling. Biological Reviews, 88, 15–30. 10.1111/j.1469-185X.2012.00235.x PubMed DOI PMC
Zobel, M. (1997). The relative role of species pool in determining plant species richness: An alternative explanation of species coexistence? Trends in Ecology & Evolution, 12, 266–269. 10.1016/S0169-5347(97)01096-3 PubMed DOI
Zobel, M. , & Kalamees, R. (2005). Diversity and dispersal — Can the link be approached experimentally? Folia Geobotanica, 40, 3–11. 10.1007/BF02803040 DOI
Zobel, M. , van der Maarel, E. , & Dupré, C. (1998). Species pool: The concept, its determination and significance for community restoration. Applied Vegetation Science, 1, 55–66. 10.2307/1479085 DOI
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10.5061/dryad.fqz612jq9