Genome-wide single nucleotide polymorphism markers reveal population structure and dispersal direction of an expanding nuisance algal bloom species
Jazyk angličtina Země Anglie, Velká Británie Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
33386639
DOI
10.1111/mec.15787
Knihovny.cz E-zdroje
- Klíčová slova
- Gonyostomum semen, RAD-seq, SNPs, algal blooms, invasive species, population structure,
- MeSH
- Heterokontophyta * MeSH
- jednonukleotidový polymorfismus * genetika MeSH
- škodlivý vodní květ MeSH
- tok genů MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Evropa MeSH
Species invasion and range expansion are currently under scrutiny due to increasing anthropogenic impact on the natural environment. This is also true for harmful algal blooms, which have been reported to have increased in frequency. However, this research is challenging due to the ephemeral nature, small size and mostly low concentrations of microalgae in the environment. One such species is the nuisance microalga Gonyostomum semen (Raphidophyceae), which has increased in occurrence in northern Europe in recent decades. The question of whether the species has expanded its habitat range or if it was already present in the lakes but was too rare to be detected remains unanswered. The aim of the present study was to determine the genetic structure and dispersal pathways of G. semen using RAD (restriction-site-associated DNA) tag sequencing. For G. semen, which has a huge genome (32 Gbp), we faced particular challenges, but were nevertheless able to recover over 1000 single nucleotide polymorphisms at high coverage. Our data revealed a distinct population genetic structure, demonstrating a divide of western and eastern populations that probably represent different lineages. Despite significant genetic differentiation among lakes, we found only limited isolation-by-distance. While we had expected a pattern of recent expansion northwards, the data demonstrated gene flow from the northeast/east towards the southwest/west. This genetic signature suggests that the observed gene flow may be due to dispersal by autumn migratory birds, which act as dispersal vectors of resistant resting propagules that form at the end of the G. semen blooms.
Department of Biology Lund University Lund Sweden
Department of Biology National Bioinformatics Infrastructure Sweden SciLifeLab Lund Sweden
Department of Botany Faculty of Science Charles University Prague Czech Republic
Department of Ecology and Genetics Uppsala University Uppsala Sweden
Institute of Ecology and Evolution University of Oregon Eugene OR USA
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RefSeq
PRJNA659541