The microbiome in urinary tract infections in children - an update
Jazyk angličtina Země Spojené státy americké Médium print
Typ dokumentu časopisecké články, přehledy
PubMed
33449574
DOI
10.1097/mou.0000000000000858
PII: 00042307-202103000-00016
Knihovny.cz E-zdroje
- MeSH
- analýza moči MeSH
- antibakteriální látky terapeutické užití MeSH
- dítě MeSH
- dospělí MeSH
- infekce močového ústrojí * diagnóza farmakoterapie MeSH
- kojenec MeSH
- lidé MeSH
- mikrobiota * MeSH
- RNA ribozomální 16S genetika MeSH
- Check Tag
- dítě MeSH
- dospělí MeSH
- kojenec MeSH
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- přehledy MeSH
- Názvy látek
- antibakteriální látky MeSH
- RNA ribozomální 16S MeSH
PURPOSE OF REVIEW: Urinary tract infection (UTI) is one of the most common pediatric infections worldwide. Recently introduced 16S rRNA sequencing allows detailed identification of bacteria involved in UTI on a species-based level. The urogenital microbiome in children is scarcely investigated, with underlying conditions differing from adults. Improvement in diagnostic and therapeutic approaches can help to minimize unnecessary antibiotic treatments, thereby protecting the physiological microbiome. RECENT FINDINGS: Healthy bladders of children display a distinct microbiome than those of adults. UTI is characterized by changes in bacterial composition, with a high prevalence of Enterobacterales. There is a correlation between bacterial species and the pH of the urine, so a characteristic age-related pathogen pattern can be found due to the acidic urine in infants and more alkaline urine in older children. Recently, new methods were proposed to overcome the suboptimal diagnostic performance of urine cultures and urine dipstick test. This allows precise treatment decisions and helps to prevent chronification of UTI, related voiding dysfunctions and renal scaring, systemic abiosis, and the development of antibiotic resistance. SUMMARY: Uropathogens involved in UTIs in children should be identified with precision to allow targeted therapeutic decisions. This can also help preventing the destruction of the microbiome homeostasis, which could result in a life-long dysbiosis. New treatment approaches and recolonization with probiotics are necessary due to increasing intrinsic antibiotic resistance of bacteria.
Department of Urology 2nd Faculty of Medicine Charles University Prague Czech Republic
Department of Urology Comprehensive Cancer Center Medical University of Vienna Vienna Austria
Department of Urology King Fahad Specialist Hospital Dammam Saudi Arabia
Department of Urology University of Jordan Amman Jordan
Department of Urology University of Texas Southwestern Dallas Texas USA
Departments of Urology Weill Cornell Medical College New York New York
European Association of Urology research foundation Arnhem Netherlands
Karl Landsteiner Institute of Urology and Andrology Vienna Austria
Zobrazit více v PubMed
Thomas-White K, Forster SC, Kumar N, et al. Culturing of female bladder bacteria reveals an interconnected urogenital microbiota. Nat Commun 2018; 9:1557.
Bucevic Popovic V, Situm M, Chow CT, et al. The urinary microbiome associated with bladder cancer. Sci Rep 2018; 8:12157.
Shaikh N, Hoberman A, Hum SW, et al. Development and validation of a calculator for estimating the probability of urinary tract infection in young febrile children. JAMA Pediatr 2018; 172:550–556.
Shrestha LB, Baral R, Poudel P, et al. etiological and antimicrobial susceptibility profile of pediatric urinary tract infections in a tertiary care hospital of Nepal. BMC Pediatr 2019; 19:36.
Leung AKC, Wong AHC, Leung AAM, Hon KL. Urinary tract infection in children. Recent Pat Inflamm Allergy Drug Discov 2019; 13:2–18.
Eisenberg ML, Galusha D, Kennedy WA, Cullen MR. The relationship between neonatal circumcision, urinary tract infection, and health. World J Mens Health 2018; 36:176–182.
Balighian E, Burke M. Urinary tract infections in children. Pediatr Rev 2018; 39:3–12.
Shaki D, Hodik G, Elamour S, et al. Urinary tract infections in children < 2 years of age hospitalized in a tertiary medical center in Southern Israel: epidemiologic, imaging, and microbiologic characteristics of first episode in life. Eur J Clin Microbiol Infect Dis 2020; 39:955–963.
Kinneman L, Zhu W, Wong WSW, et al. Assessment of the urinary microbiome in children younger than 48 months. Pediatr Infect Dis J 2020; 39:565–570.
Kispal ZF, Vajda P, Kardos D, et al. The local microbiome after pediatric bladder augmentation: intestinal segments and the native urinary bladder host similar mucosal microbiota. J Pediatr Urol 2019; 15: 30 e1–e7.
Moustafa A, Li W, Singh H, et al. Microbial metagenome of urinary tract infection. Sci Rep 2018; 8:4333.
Ganesh R, Shrestha D, Bhattachan B, Rai G. Epidemiology of urinary tract infection and antimicrobial resistance in a pediatric hospital in Nepal. BMC Infect Dis 2019; 19:420.
Lai HC, Chang SN, Lin HC, et al. Association between urine pH and common uropathogens in children with urinary tract infections [published online ahead of print, 2019 Sep 28]. J Microbiol Immunol Infect 2019; S1684-1182(19)30133-1.
Vazouras K, Velali K, Tassiou I, et al. Antibiotic treatment and antimicrobial resistance in children with urinary tract infections. J Glob Antimicrob Resist 2020; 20:4–10.
Ganie NAea. Culture sensitivity and antibiotic profile in urinary tract infection in children between 1-15 years. Int J Contemp Pediatr 2019; 6:1638–1641. [S.l.].
Urmi UL, Jahan N, Nahar S, et al. Gram-positive uropathogens: empirical treatment and emerging antimicrobial resistance. Biomed Res Clin Pract 2019; 4:1–4.
Shaikh N, Osio VA, Wessel CB, Jeong JH. Prevalence of asymptomatic bacteriuria in children: a meta-analysis. J Pediatr 2020; 217:253–257.
Demir M, Kazanasmaz H. Uropathogens and antibiotic resistance in the community and hospital-induced urinary tract infected children. J Glob Antimicrob Resist 2020; 20:68–73.
Doyev R, Ben-Shalom E, Megged O. The predictive utility of prior positive urine culture in children with recurrent urinary tract infections. Eur J Pediatr 2020; 179:415–421.
Pennesi M, Amoroso S, Bassanese G, et al. Frequency of urinary tract infection in children with antenatal diagnosis of urinary tract dilatation. Arch Dis Child 2020; 105:260–263.
Rodriguez Cuellar CI, Wang PZT, Freundlich M, Filler G. Educational review: role of the pediatric nephrologists in the work-up and management of kidney stones. Pediatr Nephrol 2020; 35:383–397.
Cetin N, Gencler A, Kavaz Tufan A. Risk factors for development of urinary tract infection in children with nephrolithiasis. J Paediatr Child Health 2020; 56:76–80.
Uwaezuoke SN, Ndu IK, Eze IC. The prevalence and risk of urinary tract infection in malnourished children: a systematic review and meta-analysis. BMC Pediatr 2019; 19:261.
Deng QF, Chu H, Wen Z, Cao YS. Vitamin D and urinary tract infection: a systematic review and meta-analysis. Ann Clin Lab Sci 2019; 49:134–142.
C Radmayr GB, Dogan HS, Nijman JM, et al. Paediatric Urology. EAU Paediatr Urol Guidel 2020; ISBN 978-94-92671-07-3.
Coulthard MG. Using urine nitrite sticks to test for urinary tract infection in children aged < 2 years: a meta-analysis. Pediatr Nephrol 2019; 34:1283–1288.
Thapaliya J, Khadka P, Thapa S, Gongal C. Enhanced quantitative urine culture technique, a slight modification, in detecting under-diagnosed pediatric urinary tract infection. BMC Res Notes 2020; 13:5.
Broeren M, Nowacki R, Halbertsma F, et al. Urine flow cytometry is an adequate screening tool for urinary tract infections in children. Eur J Pediatr 2019; 178:363–368.
Shaikh N, Martin JM, Hoberman A, et al. Biomarkers that differentiate false positive urinalyses from true urinary tract infection. Pediatr Nephrol 2020; 35:321–329.
Gaither TW, Selekman R, Kazi DS, Copp HL. Cost-Effectiveness of screening ultrasound after a first, febrile urinary tract infection in children age 2-24 months. J Pediatr 2020; 216:73–81.e1.
Leclercq R, Cantón R, Brown DF, et al. EUCAST expert rules in antimicrobial susceptibility testing. Clin Microbiol Infect. 2013; 19:141–160. Including Update Intrinsic Resistance and Unusual Phenotypes Version 3.2 February 2020.
Forster CS, Hsieh MH, Perez-Losada M, et al. A single intravesical instillation of Lactobacillus rhamnosus GG is safe in children and adults with neuropathic bladder: A phase Ia clinical trial [published online ahead of print, 2019 May 17]. J Spinal Cord Med 2019; 1–8.
Advanced Analytics Group of Pediatric U, Group ORCPM. Targeted workup after initial febrile urinary tract infection: using a novel machine learning model to identify children most likely to benefit from voiding cystourethrogram. J Urol 2019; 202:144–152.