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Are the current commercially available oximes capable of reactivating acetylcholinesterase inhibited by the nerve agents of the A-series?

. 2022 Sep ; 96 (9) : 2559-2572. [epub] 20220606

Language English Country Germany Media print-electronic

Document type Journal Article

Links

PubMed 35666269
DOI 10.1007/s00204-022-03316-z
PII: 10.1007/s00204-022-03316-z
Knihovny.cz E-resources

The misuse of novichok agents in assassination attempts has been reported in the international media since 2018. These relatively new class of neurotoxic agents is claimed to be more toxic than the agents of the G and V series and so far, there is no report yet in literature about potential antidotes against them. To shed some light into this issue, we report here the design and synthesis of NTMGMP, a surrogate of A-242 and also the first surrogate of a novichok agent useful for experimental evaluation of antidotes. Furthermore, the efficiency of the current commercial oximes to reactivate NTMGMP-inhibited acetylcholinesterase (AChE) was evaluated. The Ellman test was used to confirm the complete inhibition of AChE, and to compare the subsequent rates of reactivation in vitro as well as to evaluate aging. In parallel, molecular docking, molecular dynamics and MM-PBSA studies were performed on a computational model of the human AChE (HssAChE)/NTMGMP complex to assess the reactivation performances of the commercial oximes in silico. Experimental and theoretical studies matched the exact hierarchy of efficiency and pointed to trimedoxime as the most promising commercial oxime for reactivation of AChE inhibited by A-242.

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Abraham MJ, Murtola T, Schulz R et al (2015) GROMACS: high performance molecular simulations through multi-level parallelism from laptops to supercomputers. SoftwareX 1–2:19–25. https://doi.org/10.1016/j.softx.2015.06.001 DOI

Allgardsson A, Berg L, Akfur C et al (2016) Structure of a prereaction complex between the nerve agent sarin, its biological target acetylcholinesterase, and the antidote HI-6. Proc Natl Acad Sci 113(20):5514–5519 DOI

Bajgar J (2004) Organophosphates/nerve agent poisoning: mechanism of action, diagnosis, prophylaxis, and treatment. Adv Clin Chem 38(1):151–216 DOI

Bajgar J, Fusek J, Kuca K, Bartosova L, Jun D (2007) Treatment of organophosphate intoxication using cholinesterase reactivators: facts and fiction. Mini Rev Med Chem 7(5):461–466 DOI

Berman HM, Battistuz T, Bhat TN et al (2002) The protein data bank. Acta Crystallogr D Biol Crystallogr. https://doi.org/10.1107/S0907444902003451 PubMed DOI

Bester SM, Guelta MA, Cheung J et al (2018) Structural Insights of Stereospecific Inhibition of Human Acetylcholinesterase by VX and Subsequent Reactivation by HI-6. Chem Res Toxicol. https://doi.org/10.1021/acs.chemrestox.8b00294 PubMed DOI

Bolt HM, Hengstler JG (2022) Recent research on Novichok. Arch Toxicol 96:1137–1140 DOI

Bowie JU, Lüthy R, Eisenberg D (1991) A method to identify protein sequences that fold into a known three-dimensional stucture. Science. https://doi.org/10.1126/science.1853201 PubMed DOI

Bussi G, Donadio D, Parrinello M (2007) Canonical sampling through velocity rescaling. J Chem Phys. https://doi.org/10.1063/1.2408420 PubMed DOI

Cavalcante SF, Kitagawa DA, Rodrigues RB et al (2019a) One-pot synthesis of NEMP, a VX surrogate, and reactivation of NEMP-inhibited Electrophorus eel acetylcholinesterase by current antidotes. J Brazil Chem Soc 30:1095–1102

Cavalcante SFD, Kitagawa DAS, Rodrigues RB et al (2019b) Synthesis and in vitro evaluation of neutral aryloximes as reactivators of Electrophorus eel acetylcholinesterase inhibited by NEMP, a VX surrogate. Chem-Biol Interact. https://doi.org/10.1016/j.cbi.2019.05.048 PubMed DOI

da Silva JAV, Nepovimova E, Ramalho TC, Kuca K, Celmar Costa França T (2019) Molecular modeling studies on the interactions of 7-methoxytacrine-4-pyridinealdoxime, 4-PA, 2-PAM, and obidoxime with VX-inhibited human acetylcholinesterase: a near attack conformation approach. J Enzym Inhib Med Ch. https://doi.org/10.1080/14756366.2019.1609953 DOI

Da Silva AWS, Vranken WF (2012) ACPYPE-Antechamber python parser interface. BMC Res Notes 5(1):1–8 DOI

De A, Cavalcante SF, Kitagawa DAS, Rodrigues RB et al (2018) Straightforward, economical procedures for microscale ellman⇔s test for cholinesterase inhibition and reactivation. Quim Nova. https://doi.org/10.21577/0100-4042.20170278 DOI

de Cavalcante ASF, Simas AB, Kuča K (2019) Nerve agents’ surrogates: invaluable tools for development of acetylcholinesterase reactivators. Curr Organ Chem 23(14):1539–1559 DOI

Franca TCC, Kitagawa DAS, Cavalcante SFD, da Silva JAV, Nepovimova E, Kuca K (2019) Novichoks: the dangerous fourth generation of chemical weapons. Int J Mol Sci. https://doi.org/10.3390/ijms20051222 PubMed DOI PMC

Goncalves AD, Franca TCC, Wilter A, Figueroa-Villar JD (2006) Molecular dynamics of the interaction of pralidoxime and deazapralidoxime with acetylcholinesterase inhibited by the neurotoxic agent tabun. J Brazil Chem Soc 17(5):968–975. https://doi.org/10.1590/s0103-50532006000500022 DOI

Goncalves AD, Franca TCC, Figueroa-Villar JD, Pascutti PG (2010) Conformational analysis of toxogonine, TMB-4 and HI-6 using PM6 and RM1 methods. J Brazil Chem Soc 21(1):179-U82. https://doi.org/10.1590/s0103-50532010000100025 DOI

Gorecki L, Korabecny J, Musilek K et al (2016) SAR study to find optimal cholinesterase reactivator against organophosphorous nerve agents and pesticides. Arch Toxicol 90(12):2831–2859 DOI

Hansen N, Van Gunsteren WF (2014) Practical aspects of free-energy calculations: a review. J Chem Theory Comput 10:2632–2647 DOI

Hehre WOSKPDBDA, Johnson JOP (2006) Spartan ‘08 Tutorial and User’s Guide. Wavefunction, Irvine

Homeyer N, Gohlke H (2012) Free energy calculations by the molecular mechanics poisson-boltzmann surface area method. Mol Inf. https://doi.org/10.1002/minf.201100135 DOI

Hosseini SE, Saeidian H, Amozadeh A, Naseri MT, Babri M (2016) Fragmentation pathways and structural characterization of organophosphorus compounds related to the Chemical Weapons Convention by electron ionization and electrospray ionization tandem mass spectrometry. Rapid Commun Mass Spectrom. https://doi.org/10.1002/rcm.7757 PubMed DOI

Humphrey W, Dalke A, Schulten K (1996) VMD: visual molecular dynamics. Graphics 14:33–38. https://doi.org/10.1016/0263-7855(96)00018-5 DOI

Imrit YA, Bhakhoa H, Sergeieva T et al (2020) A theoretical study of the hydrolysis mechanism of A-234; the suspected novichok agent in the Skripal attack. RSC Adv 10(47):27884–27893. https://doi.org/10.1039/D0RA05086E PubMed DOI PMC

Jeong K, Choi J (2019) Theoretical study on the toxicity of ‘Novichok’ agent candidates. R Soc Open Sci. https://doi.org/10.1098/rsos.190414 PubMed DOI PMC

Johnson LA, Robertson AJ, Baxter NJ et al (2018) Van der Waals contact between nucleophile and transferring phosphorus is insufficient to achieve enzyme transition-state architecture. ACS Catal. https://doi.org/10.1021/acscatal.8b01612 DOI

Jorgensen WL, Maxwell DS, Tirado-Rives J (1996) Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids. J Am Chem Soc. https://doi.org/10.1021/ja9621760 DOI

Kitagawa DA, Rodrigues RB, Silva TN et al (2021) Design, synthesis, in silico studies and in vitro evaluation of isatin-pyridine oximes hybrids as novel acetylcholinesterase reactivators. J Enzym Inhib Med Ch 36(1):1370–1377 DOI

Kloske M, Witkiewicz Z (2019) Novichoks—the A group of organophosphorus chemical warfare agents. Chemosphere 221:672–682. https://doi.org/10.1016/j.chemosphere.2019.01.054 PubMed DOI

Kontoyianni M, McClellan LM, Sokol GS (2004) Evaluation of docking performance: comparative data on docking algorithms. J Med Chem. https://doi.org/10.1021/jm0302997 PubMed DOI

Kua J, Zhang Y, Eslami AC, Butler JR, McCammon JA (2003) Studying the roles of W86, E202, and Y337 in binding of acetylcholine to acetylcholinesterase using a combined molecular dynamics and multiple docking approach. Protein Sci 12(12):2675–2684 DOI

Kucera T, Gorecki L, Soukup O et al (2019) Oxime K203: a drug candidate for the treatment of tabun intoxication. Arch Toxicol 93(3):673–691 DOI

Kumari R, Kumar R, Consortium OSDD, Lynn A (2014) g _ mmpbsa - A GROMACS tool for MM-PBSA and its optimization for high-throughput binding energy calculations. J Chem Inf Model. https://doi.org/10.1021/ci500020m PubMed DOI

Lewis S (2018) Salisbury, Novichok and international law on the use of force. RUSI J 163(4):10–19. https://doi.org/10.1080/03071847.2018.1529889 DOI

Lüthy R, Bowie JU, Eisenberg D (1992) Assessment of protein models with three-dimensional profiles. Nature. https://doi.org/10.1038/356083a0 PubMed DOI

Malinak D, Nepovimova E, Jun D, Musilek K, Kuca K (2018) Novel group of AChE reactivators—synthesis, in vitro reactivation and molecular docking study. Molecules 23(9):2291 DOI

Meek EC, Chambers HW, Coban A et al (2012) Synthesis and in vitro and in vivo inhibition potencies of highly relevant nerve agent surrogates. Toxicol Sci. https://doi.org/10.1093/toxsci/kfs013 PubMed DOI

Mirzayanov VS (2009) State secrets: an insider`s chronicle of the Russian Chemical Weapons Program. Outskirts Press Inc, Parker

Nepovimova E, Kuca K (2018) Chemical warfare agent NOVICHOK—mini-review of available data. Food Chem Toxicol 121:343–350. https://doi.org/10.1016/j.fct.2018.09.015 PubMed DOI

Nepovimova E, Kuca K (2019) The history of poisoning: from ancient times until modern ERA. Arch Toxicol 93(1):11–24 DOI

Oh K-A, Yang GY, Jun D, Kuca K, Jung Y-S (2006) Bis-pyridiumaldoxime reactivators connected with CH2O (CH2) nOCH2 linkers between pyridinium rings and their reactivity against VX. Bioorg Med Chem Lett 16(18):4852–4855 DOI

Parrinello M, Rahman A (1981) Polymorphic transitions in single crystals: A new molecular dynamics method. J Appl Phys. https://doi.org/10.1063/1.328693 DOI

Ramachandran GN, Ramakrishnan C, Sasisekharan V (1963) Stereochemistry of polypeptide chain configurations. J Mol Biol 7:95–99 DOI

Ribeiro AAST, Horta BAC, De Alencastro RB (2008) MKTOP: A program for automatic construction of molecular topologies. J Brazil Chem Soc. https://doi.org/10.1590/S0103-50532008000700031 DOI

Rocha GB, Freire RO, Simas AM, Stewart JJ (2006) Rm1: a reparameterization of am1 for h, c, n, o, p, s, f, cl, br, and i. J Comput Chem 27(10):1101–1111. https://doi.org/10.1002/jcc.20425 PubMed DOI

Santos MC, Botelho FD, Gonçalves AS, Kuca K, Nepovimova E, Cavalcante SFA, Lima ALS, França TCC (2022) Theoretical assessment of the performances of commercial oximes on the reactivation of acetylcholinesterase inhibited by the nerve agent A-242 (novichok). Food Chem Toxicol 165:113084. https://doi.org/10.1016/j.fct.2022.113084 PubMed DOI

Steindl D, Boehmerle W, Körner R et al (2021) Novichok nerve agent poisoning. Lancet 397(10270):249–252 DOI

Swain M (2012) Chemicalize. org. vol 52. ACS Publications, p 613–615

Tattersall JE (1993) Ion channel blockade by oximes and recovery of diaphragm muscle from soman poisoning in vitro. Br J Pharmacol 108(4):1006–1015 DOI

Thomsen R, Christensen MH (2006) MolDock: a new technique for high-accuracy molecular docking. J Med Chem 49(11):3315–3321. https://doi.org/10.1021/jm051197e PubMed DOI

Walker RC, Crowley IF, Case DA (2008) The implementation of a fast and accurate QM/MM potential method in Amber. J Comput Chem. https://doi.org/10.1002/jcc.20857 PubMed DOI

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