Towards the phylogenetic placement of the enigmatic African genus Prolabeops Schultz, 1941
Jazyk angličtina Země Anglie, Velká Británie Médium print-electronic
Typ dokumentu časopisecké články
Grantová podpora
Ministry of Scientific Research and Innovation
Swiss National Science Foundation - Switzerland
PubMed
36053860
PubMed Central
PMC9826184
DOI
10.1111/jfb.15205
Knihovny.cz E-zdroje
- Klíčová slova
- Cyprinidae, Cypriniformes, Enteromius, Smiliogastrinae,
- MeSH
- Cyprinidae * anatomie a histologie MeSH
- fylogeneze MeSH
- genom mitochondriální * MeSH
- máloostní * genetika MeSH
- mitochondriální proteiny genetika MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- mitochondriální proteiny MeSH
The small cyprinid genus Prolabeops Schultz, 1941 is restricted to the Nyong and Sanaga River systems in Cameroon. In the past, the genus had been suggested to be either a member of the Labeoninae, Torinae or the Smiliogastrinae mainly on the basis of morphological similarities, and it is nowadays considered as incertae sedis within the Cypriniformes. This study provides the first attempt to reveal the phylogenetic position of Prolabeops using molecular data. For this purpose, the authors sequenced a large fraction of the mitochondrial genome (c. 13,600 bp), including all mitochondrial protein coding genes, of two Prolabeops melanhypopterus specimens and an additional four Enteromius specimens. The large-scale phylogenetic analysis was based on an alignment including all mitochondrial protein coding genes of 902 specimens representing c. 899 cypriniform species. Prolabeops was clearly recovered within the African Smiliogastrinae, forming a weakly supported clade together with Enteromius jae, Enteromius hulstaerti and Barboides gracilis. The study data underline the urgent need of a thorough taxonomic revision of the small African barbs collectively placed in the genus Enteromius.
Department of Biological Sciences University of Ngaoundéré Ngaoundéré Cameroon
Department of Ichthyology SNSB Bavarian State Collection Zoology Munich Germany
Department of Management of Fisheries and Aquatic Ecosystems University of Douala Douala Cameroon
Department of Zoology Faculty of Science Charles University Prague Czech Republic
Faculty of Biology Division of Evolutionary Biology LMU Munich Martinsried Germany
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Berrebi, P. , Kottelat, M. , Skelton, P. , & Rab, P. (1996). Systematics of
Betancur, R. R. , Wiley, E. O. , Arratia, G. , Acero, A. , Bailly, N. , Miya, M. , … Ortí, G. (2017). Phylogenetic classification of bony fishes. BMC Evolutionary Biology, 17, 40. PubMed PMC
Bleeker, P. (1863). Mémoire sur les poissons de la côte de Guinée. Verhandelingen van de Hollandsche Maatschappij der Wetenschappen te Haarlem(Ser. 2), 18, 1–136.
Bohlen, J. , & Šlechtová, V. (2009). Phylogenetic position of the fish genus
Boulenger, G. A. (1902). Additions à la faune ichthyologique de bassin du Congo. Bruxelles: Spineux & Cie.
Boulenger, G. A. (1903). Descriptions of new freshwater fishes from southern Cameroon. Annals and Magazine of Natural History (Series 7), 12, 435–441.
Boulenger, G. A. (1911). Descriptions of two new African barbels. Annals and Magazine of Natural History, 8, 369–370.
Boulenger, G. A. (1921). Description d'un poisson aveugle découvert par M. G. Geerts dans la grotte de Thysville (Bas‐Congo). Revue de Zoologie Africaine, 9, 252–253.
Brüning, C. (1929).
Chen, W.‐J. , Lheknim, V. , & Mayden, R. L. (2009). Molecular phylogeny of the Cobitoidea (Teleostei: Cypriniformes) revisited: Position of enigmatic loach PubMed
Chernomor, O. , von Haeseler, A. , & Minh, B. Q. (2016). Terrace aware data structure for phylogenomic inference from supermatrices. Systematic Biology, 65, 997–1008. PubMed PMC
Conway, K. W. , Kubicek, K. M. & Britz, R. (2017). Morphological novelty and modest developmental truncation in Barboides, Africa's smallest vertebrates (Teleostei: Cyprinidae). Journal of Morphology, 278, 750–767. PubMed
Cope, E. D. (1867). Synopsis of the Cyprinidæ of Pennsylvania. With supplement on some new species of American and African fishes. Transactions of the American Philosophical Society, 13, 400–407.
Cuvier, G. (1816). Le Règne Animal distribué d'après son organisation pour servir de base à l'histoire naturelle des animaux et d'introduction à l'anatomie comparée. Les reptiles, les poissons, les mollusques et les annélides. Paris: Deterville.
Daget, J. (1984). Contribution a la faune du Cameroun. Poissons des fleuves cotiers. Bulletin du Museum National d'Histoire Naturelle Section A Zoologie Biologie et Ecologie Animales, 6, 177–202.
de Weirdt, D. , Getahun, A. , Tshibwabwa, S. M. , & Teugels, G. G. (2007). The fresh and brackish water fishes of lower Guinea: Families, genera and species. Cyprinidae. In Stiassny M. L. J., Teugels G. G., & Hopkins C. D. (Eds.), The fresh and brackish water fishes of lower Guinea, West‐Central Africa (pp. 466–572). Paris: Publications Scientifiques du Museum Diffusion.
Di Caporiacco, L. (1926). Un nuovo genere di Ciprinide somalo delle acque di pozzo. Monitore Zoologico Italiano, 37, 23–25.
Englmaier, G. K. , Tesfaye, G. , & Bogutskaya, N. G. (2020). A new species of Enteromius (Actinopterygii, Cyprinidae, Smiliogastrinae) from the Awash River, Ethiopia, and the re‐establishment of PubMed PMC
Fowler, H. W. (1935). Scientific results of the Vernay‐Lang Kalahari expedition, March to September, 1930. Freshwater fishes. Annals of the Transvaal Museum, 16, 251–293.
Fowler, H. W. (1936). Zoological results of the George Vanderbilt African expedition of 1934. Part III − The fresh water fishes. Proceedings of the Academy of Natural Sciences of Philadelphia, 88, 243–351.
Fricke, R. , Eschmeyer, W. N. & van der Laan, R. e. (2021). Eschmeyer's catalog of fishes: Genera, species, references. Retrieved from http://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp
Froese, R. & Pauly, D. (2021). FishBase, World Wide Web electronic publication . Retrieved from www.fishbase.org
Hamilton, F. (1822). An account of the fishes found in the river Ganges and its branches. Edinburgh: Archibald Constable and Company.
Hayes, M. M. (2020). Molecular investigations of the diversity of freshwater fishes across three continents (PhD dissertation). p. 131. Auburn University, Auburn, AL.
Hayes, M. M. , & Armbruster, J. W. (2017). The taxonomy and relationships of the African small barbs (Cypriniformes: Cyprinidae). Copeia, 105, 348–362.
He, S. , Mayden, R. L. , Wang, X. , Wang, W. , Tang, K. L. , & Chen, Y. (2008). Molecular phylogenetics of the family Cyprinidae (Actinopterygii: Cypriniformes) as evidenced by sequence variation in the first intron of S7 ribosomal protein‐coding gene: Further evidence from a nuclear gene of the systematic chaos in the family. Molecular Phylogenetics and Evolution, 46, 818–829. PubMed
Hoang, D. T. , Chernomor, O. , von Haeseler, A. , Minh, B. Q. , & Vinh, L. S. (2018). UFBoot2: Improving the ultrafast bootstrap approximation. Molecular Biology and Evolution, 35, 518–522. PubMed PMC
Huelsenbeck, J. P. , & Ronquist, F. (2001). MRBAYES: Bayesian inference ofphylogenetic trees. Bioinformatics, 17, 754–755. PubMed
Kalyaanamoorthy, S. , Minh, B. Q. , Wong, T. K. F. , von Haeseler, A. , & Jermiin, L. S. (2017). ModelFinder: Fast model selection for accurate phylogenetic estimates. Nature Methods, 14, 587–589. PubMed PMC
Kawaguchi, A. , Miya, M. , & Nishida, M. (2001). Complete mitochondrial DNA sequence of Aulopus japonicas (Telostei: Aulopiformes), a basal Eurypterygii: Longer DNA sequences and higher‐level relationships. Ichthyological Research, 48, 213–223.
Kearse, M. , Moir, R. , Wilson, A. , Stones‐Havas, S. , Cheung, M. , Sturrock, S. , … Drummond, A. (2012). Geneious basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics, 28, 1647–1649. PubMed PMC
Kisekelwa, T . (2019). The fish diversity of the river systems of the Kahuzi Biega National Park (East DRC) (Doctoral thesis). KU Leuven, Belgium. Retrieved from https://limo.libis.be/primo-explore/fulldisplay?docid=LIRIAS2379238&context=L&vid=Lirias&search_scope=Lirias&tab=default_tab&fromSitemap=1
Kottelat, M. , Britz, R. , Hui, T. H. , & Witte, K.‐E. (2006). PubMed PMC
Lavoue, S. (2020). Origins of Afrotropical freshwater fishes. Zoological Journal of the Linnean Society, 188, 345–411.
Malmstrøm, M. , Britz, R. , Matschiner, M. , Tørresen, O. K. , Hadiaty, R. K. , Yaakob, N. , … Rüber, L. (2018). The most developmentally truncated fishes show extensive PubMed PMC
Mayden, R. L. , & Chen, W.‐J. (2010). The world's smallest vertebrate species of the genus PubMed
Minh, B. Q. , Nguyen, M. A. , & von Haeseler, A. (2013). Ultrafast approximation for phylogenetic bootstrap. Molecular Biology and Evolution, 30, 1188–1195. PubMed PMC
Mullens, N. , Sonet, G. , Decru, E. , Virgilio, M. , Snoeks, J. , & Vreven, E. (2020). Mitogenomic characterization and systematic placement of The Congo blind barb Caecobarbus geertsii (Cypriniformes: Cyprinidae). International Journal of Biological Macromolecules, 161, 292–298. PubMed
Nguyen, L. T. , Schmidt, H. A. , von Haeseler, A. , & Minh, B. Q. (2015). IQ‐TREE: A fast and effective stochastic algorithm for estimating maximum‐likelihood phylogenies. Molecular Biology and Evolution, 32, 268–274. PubMed PMC
Nichols, J. T. , & Griscom, L. (1917). Fresh‐water fishes of The Congo basin obtained by the American Museum Congo Expedition, 1909–1915. Bulletin of the American Museum of Natural History, 37, 653–756.
Norman, J. R. (1932). A collection of fishes from Sierra Leone. Annals and Magazine of Natural History, 10, 180–185.
Pellegrin, J. (1928). Characinidés et Cyprinidés du Cameroun recueillis par M. Th. Monod. Description de deux espèces et d'une variété nouvelles. Bulletin de la Société Zoologique de France, 53, 309–316.
Poll, M. (1945). Descriptions de cinq espèces nouvelles de Cyprinidae du Congo belge appartenant aux genres
Poll, M. (1957). Les genres des poissons d'eau douce de l'Afrique. Bruxelles: La Direction de l'Agriculture des Forets et de l'Elevage.
Rab, P. , Machordom, A. , Perdices, A. , & Guegan, J.‐F. (1995). Karyotypes of three
Ren, Q. , & Mayden, R. L. (2016). Molecular phylogeny and biogeography of African diploid barbs, ‘
Ren, Q. , Yang, L. , Chang, C. H. , & Mayden, R. L. (2020). Molecular phylogeny and divergence of major clades in the Puntius complex (Teleostei: Cypriniformes). Zoologica Scripta, 49, 697–709.
Roberts, T. R. (2010).
Ronquist, F. , Teslenko, M. , van der Mark, P. , Ayres, D. L. , Darling, A. , Höhna, S. , … Huelsenbeck, J. P. (2012). MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61, 539–542. PubMed PMC
Rüber, L. , Kottelat, M. , Tan, H. H. , Ng, P. K. L. , & Britz, R. (2007). Evolution of miniaturization and the phylogenetic position of PubMed PMC
Rüppell, E. (1835). Neuer Nachtrag von Beschreibungen und Abbildungen neuer Fische, im Nil entdeckt. Museum Senckenbergianum: Abhandlungen aus dem Gebiete der beschreibenden Naturgeschichte, 2, 1–28.
Sanderson, M. J. , & Shaffer, H. B. (2002). Troubleshooting molecular phylogenetic analyses. Annual Review of Ecology and Systematics, 33, 49–72.
Schedel, F. D. B. , Musilova, Z. , & Schliewen, U. K. (2019). East African cichlid lineages (Teleostei: Cichlidae) might be older than their ancient host lakes: New divergence estimates for the east African cichlid radiation. BMC Evolutionary Biology, 19, 25. PubMed PMC
Schmidt, R. C. , & Bart, H. L., Jr. (2015). Nomenclatural changes should not be based on equivocally supported phylogenies: Reply to Yang et al. 2015. Molecular Phylogenetics and Evolution, 90, 193–194. PubMed
Schmidt, R. C. , Bart, H. L., Jr. , & Nyingi, D. W. (2017). Multi‐locus phylogeny reveals instances of mitochondrial introgression and unrecognized diversity in Kenyan barbs (Cyprininae: Smiliogastrini). Molecular Phylogenetics and Evolution, 111, 35–43. PubMed
Schultz, L. P. (1941). New genus and species of cyprinid fish from the Cameroons, Africa. Proceedings of the New England Zoölogical Club, XVIII, 85–90.
Schultz, L. P. (1959). A new cyprinid fish from Siam. Tropical Fish Hobbyist, 7, 36–37.
Skelton, P. (2001). A complete gutide to the freshwater fishes of southern Africa. South Africa: Struik Publishers.
Skelton, P. H. , Swartz, E. R. , & Vreven, E. J. (2018). The identity of
Smith, A. (1841).
Smith, H. M. (1933). Contributions to the ichthyology of Siam. II‐VI. Journal of the Siam Society, Natural History Supplement, 9, 53–87.
Smith, H. M. (1938).
Stiassny, M. L. J. , & Getahun, A. (2007). An overview of labeonin relationships and the phylogenetic placement of the afro‐Asian genus
Stiassny, M. L. J. , & Sakharova, H. (2016). Review of the smiliogastrin cyprinids of the Kwilu River (Kasai Basin, Central Africa), revised diagnosis for PubMed
Stout, C. C. , Tan, M. , Lemmon, A. R. , Lemmon, E. M. , & Armbruster, J. W. (2016). Resolving Cypriniformes relationships using an anchored enrichment approach. BMC Evolutionary Biology, 16, 13. PubMed PMC
Tan, H. H. , & Lim, K. P. (2002). A new species of
Tan, M. , & Armbruster, J. W. (2018). Phylogenetic classification of extant genera of fishes of the order Cypriniformes (Teleostei: Ostariophysi). Zootaxa, 4476, 6–39. PubMed
Thys van den Audenaerde, D. F. E. (1965). La redécouverte de
Thys van den Audenaerde, D. F. E. (1974). Quelques observations sur
Tsigenopoulos, C. S. , Rab, P. , Naran, D. , & Berrebi, P. (2002). Multiple origins of polyploidy in the phylogeny of southern African barbs (Cyprinidae) as inferred from mtDNA markers. Heredity, 88, 466–473. PubMed
Yang, L. , Arunachalam, M. , Sado, T. , Levin, B. A. , Golubtsov, A. S. , Freyhof, J. , … He, S. (2012). Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes). Molecular Phylogenetics and Evolution, 65, 362–379. PubMed
Yang, L. , Hirt, M. V. , Sado, T. , Arunachalam, M. , Manickam, R. , Tang, K. L. , … Miya, M. (2012). Phylogenetic placements of the barbin genera
Yang, L. , Sado, T. , Hirt, M. V. , Pasco‐Viel, E. , Arunachalam, M. , Li, J. , … Mayden, R. L. (2015). Phylogeny and polyploidy: Resolving the classification of cyprinine fishes (Teleostei: Cypriniformes). Molecular Phylogenetics and Evolution, 85, 97–116. PubMed